RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 LPAR1Q92633 364 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 GTF3C6Q969F1 213 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 WNK4Q96J92 1243 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 MAP3K14Q99558 947 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 LZTS2Q9BRK4 669 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 TANGO6Q9C0B7 1094 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 AFG3L2Q9Y4W6 797 aa12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 FRMPD2Q68DX3 1309 aaPredicted RBP12.83□□□□□ -0.36
BRCC3P1-201ENST00000508559 KLRF2D3W0D1 207 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 GOLGA8HP0CJ92 632 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 PDHBP11177 359 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 GRM1Q13255 1194 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 RGMBQ6NW40 437 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 TRIM22Q8IYM9 498 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 CCDC82Q8N4S0 544 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 GMCL1Q96IK5 515 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 HPS5Q9UPZ3 1129 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 SMC3Q9UQE7 1217 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 KIF3AQ9Y496 699 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 TLL2Q9Y6L7 1015 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 ATAD5Q96QE3 1844 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 TRPM7Q96QT4 1865 aa12.82□□□□□ -0.36
BRCC3P1-201ENST00000508559 TMEM232C9JQI7 657 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 IRF6O14896 467 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 WDR46O15213 610 aaKnown RBP12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 CETPP11597 493 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 ADD1P35611 737 aaKnown RBP12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 APLP1P51693 650 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 GTF2A2P52657 109 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 SSRP1Q08945 709 aaKnown RBP12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 SCRN1Q12765 414 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 PABPC4Q13310 644 aaKnown RBP eCLIP12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 FASTKD5Q7L8L6 764 aaKnown RBP12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 SAPCD2Q86UD0 394 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 CHURC1Q8WUH1 139 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 VAT1LQ9HCJ6 419 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 MYH4Q9Y623 1939 aa12.81□□□□□ -0.36
BRCC3P1-201ENST00000508559 GREB1LQ9C091 1923 aaPredicted RBP12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 ZBTB48P10074 688 aaPredicted RBP12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 CDC27P30260 824 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 SPRYD7Q5W111 196 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 TMTC3Q6ZXV5 915 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 FAM160B2Q86V87 743 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 STAG2Q8N3U4 1231 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 FAM184AQ8NB25 1140 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 PIBF1Q8WXW3 757 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 CCDC102AQ96A19 550 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 LLPHQ9BRT6 129 aaKnown RBP12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 SLC26A6Q9BXS9 759 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 RPAP3Q9H6T3 665 aaPredicted RBP12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 EMILIN3Q9NT22 766 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 SEC63Q9UGP8 760 aaKnown RBP12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 MAD2L2Q9UI95 211 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 FEM1BQ9UK73 627 aa12.8□□□□□ -0.36
BRCC3P1-201ENST00000508559 CCL15-CCL14A0A0B4J2E2 113 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 A0A0G2JLL6 359 aaPredicted RBP12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 PALM3A6NDB9 673 aaPredicted RBP12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 FLOT1O75955 427 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 PLEKHA8P1O95397 391 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 SNHG28P0DPA3 235 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 VCAM1P19320 739 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 STAT2P52630 851 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 IRX3P78415 501 aaPredicted RBP12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 HMGN5P82970 282 aaKnown RBP12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 CCL15Q16663 113 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 SH3D19Q5HYK7 790 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 RASGRP2Q7LDG7 609 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 PRRT2Q7Z6L0 340 aaPredicted RBP12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 CMTR1Q8N1G2 835 aaKnown RBP12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 PROCA1Q8NCQ7 364 aaPredicted RBP12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 KIFC2Q96AC6 838 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 RRP36Q96EU6 259 aaKnown RBP12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 UBA5Q9GZZ9 404 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 KCNH4Q9UQ05 1017 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 OTOFQ9HC10 1997 aa12.79□□□□□ -0.36
BRCC3P1-201ENST00000508559 PTPDC1A2A3K4 754 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 PPFIA3O75145 1194 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 IFNAR1P17181 557 aa12.78□□□□□ -0.36
BRCC3P1-201ENST00000508559 OSBPP22059 807 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms