RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 SH2D4AQ9H788 454 aa21.5■■□□□ 1.03
SKP2-204ENST00000508514 ARPP21Q9UBL0 812 aaPredicted RBP21.5■■□□□ 1.03
SKP2-204ENST00000508514 MYH8P13535 1937 aa21.5■■□□□ 1.03
SKP2-204ENST00000508514 FRMPD3Q5JV73 1810 aa21.5■■□□□ 1.03
SKP2-204ENST00000508514 M0R2C6 588 aa21.49■■□□□ 1.03
SKP2-204ENST00000508514 GIMAP6Q6P9H5 292 aa21.49■■□□□ 1.03
SKP2-204ENST00000508514 ABRAQ8N0Z2 381 aa21.49■■□□□ 1.03
SKP2-204ENST00000508514 SENP6Q9GZR1 1112 aaPredicted RBP21.49■■□□□ 1.03
SKP2-204ENST00000508514 VWA5AO00534 786 aa21.48■■□□□ 1.03
SKP2-204ENST00000508514 FAM83BQ5T0W9 1011 aa21.48■■□□□ 1.03
SKP2-204ENST00000508514 ANO1Q5XXA6 986 aa21.48■■□□□ 1.03
SKP2-204ENST00000508514 PI4K2BQ8TCG2 481 aa21.48■■□□□ 1.03
SKP2-204ENST00000508514 MAML3Q96JK9 1138 aa21.48■■□□□ 1.03
SKP2-204ENST00000508514 NUP88Q99567 741 aaPredicted RBP21.48■■□□□ 1.03
SKP2-204ENST00000508514 GREB1LQ9C091 1923 aaPredicted RBP21.48■■□□□ 1.03
SKP2-204ENST00000508514 ROBO3Q96MS0 1386 aa21.48■■□□□ 1.03
SKP2-204ENST00000508514 IGKV6D-41A0A0C4DH26 115 aa21.47■■□□□ 1.03
SKP2-204ENST00000508514 MINDY4BA8MYZ0 360 aa21.47■■□□□ 1.03
SKP2-204ENST00000508514 GPAA1O43292 621 aa21.47■■□□□ 1.03
SKP2-204ENST00000508514 MSCO60682 206 aa21.47■■□□□ 1.03
SKP2-204ENST00000508514 SEC62Q99442 399 aaKnown RBP21.47■■□□□ 1.03
SKP2-204ENST00000508514 ZNF214Q9UL59 606 aaPredicted RBP21.47■■□□□ 1.03
SKP2-204ENST00000508514 PPP1R9AQ9ULJ8 1098 aa21.47■■□□□ 1.03
SKP2-204ENST00000508514 DNM1LO00429 736 aa21.46■■□□□ 1.03
SKP2-204ENST00000508514 GJC2Q5T442 439 aaPredicted RBP21.46■■□□□ 1.03
SKP2-204ENST00000508514 RIOX2Q8IUF8 465 aa21.46■■□□□ 1.03
SKP2-204ENST00000508514 SLC25A27O95847 323 aa21.45■■□□□ 1.02
SKP2-204ENST00000508514 PGK2P07205 417 aa21.45■■□□□ 1.02
SKP2-204ENST00000508514 FCER1AP12319 257 aa21.45■■□□□ 1.02
SKP2-204ENST00000508514 GOPCQ9HD26 462 aa21.45■■□□□ 1.02
SKP2-204ENST00000508514 NYAP2Q9P242 653 aa21.45■■□□□ 1.02
SKP2-204ENST00000508514 COL11A1P12107 1806 aaPredicted RBP21.45■■□□□ 1.02
SKP2-204ENST00000508514 F5H6K3 240 aa21.44■■□□□ 1.02
SKP2-204ENST00000508514 SEPT4O43236 478 aa21.44■■□□□ 1.02
SKP2-204ENST00000508514 PRDM1O75626 825 aa21.44■■□□□ 1.02
SKP2-204ENST00000508514 NDUFB10O96000 172 aa21.44■■□□□ 1.02
SKP2-204ENST00000508514 ZFYP08048 801 aaPredicted RBP21.44■■□□□ 1.02
SKP2-204ENST00000508514 STAT3P40763 770 aa21.44■■□□□ 1.02
SKP2-204ENST00000508514 ATN1P54259 1190 aaPredicted RBP21.44■■□□□ 1.02
SKP2-204ENST00000508514 KLRC3Q07444 240 aa21.44■■□□□ 1.02
SKP2-204ENST00000508514 ZNF792Q3KQV3 632 aa21.44■■□□□ 1.02
SKP2-204ENST00000508514 GPATCH3Q96I76 525 aa21.44■■□□□ 1.02
SKP2-204ENST00000508514 MKNK2Q9HBH9 465 aa21.44■■□□□ 1.02
SKP2-204ENST00000508514 COL6A3P12111 3177 aa21.43■■□□□ 1.02
SKP2-204ENST00000508514 PATL2C9JE40 543 aaKnown RBP21.43■■□□□ 1.02
SKP2-204ENST00000508514 RAD21O60216 631 aa21.43■■□□□ 1.02
SKP2-204ENST00000508514 TAL1P17542 331 aaPredicted RBP21.43■■□□□ 1.02
SKP2-204ENST00000508514 MDM2Q00987 491 aaPredicted RBP21.43■■□□□ 1.02
SKP2-204ENST00000508514 LRIT3Q3SXY7 679 aa21.43■■□□□ 1.02
SKP2-204ENST00000508514 IFNL3Q8IZI9 196 aa21.43■■□□□ 1.02
SKP2-204ENST00000508514 TDHQ8IZJ6 230 aa21.43■■□□□ 1.02
SKP2-204ENST00000508514 MMP19Q99542 508 aa21.43■■□□□ 1.02
SKP2-204ENST00000508514 UBE2OQ9C0C9 1292 aaKnown RBP21.43■■□□□ 1.02
SKP2-204ENST00000508514 RIPK3Q9Y572 518 aa21.43■■□□□ 1.02
SKP2-204ENST00000508514 FOXP2O15409 715 aa21.42■■□□□ 1.02
SKP2-204ENST00000508514 TTC41PQ6P2S7 1318 aa21.42■■□□□ 1.02
SKP2-204ENST00000508514 SALL3Q9BXA9 1300 aa21.42■■□□□ 1.02
SKP2-204ENST00000508514 SLC5A4Q9NY91 659 aa21.42■■□□□ 1.02
SKP2-204ENST00000508514 CLIP2Q9UDT6 1046 aa21.42■■□□□ 1.02
SKP2-204ENST00000508514 ZNFX1Q9P2E3 1918 aaKnown RBP21.41■■□□□ 1.02
SKP2-204ENST00000508514 GNAT2P19087 354 aa21.41■■□□□ 1.02
SKP2-204ENST00000508514 FAM47AQ5JRC9 791 aa21.41■■□□□ 1.02
SKP2-204ENST00000508514 ARRDC4Q8NCT1 418 aa21.41■■□□□ 1.02
SKP2-204ENST00000508514 MKL1Q969V6 931 aa21.41■■□□□ 1.02
SKP2-204ENST00000508514 CEP95Q96GE4 821 aa21.41■■□□□ 1.02
SKP2-204ENST00000508514 SLF1Q9BQI6 1058 aa21.41■■□□□ 1.02
SKP2-204ENST00000508514 APPP05067 770 aa21.4■■□□□ 1.02
SKP2-204ENST00000508514 TDO2P48775 406 aa21.4■■□□□ 1.02
SKP2-204ENST00000508514 RTP1P59025 263 aa21.4■■□□□ 1.02
SKP2-204ENST00000508514 LRRC41Q15345 812 aa21.4■■□□□ 1.02
SKP2-204ENST00000508514 ZMYM1Q5SVZ6 1142 aa21.4■■□□□ 1.02
SKP2-204ENST00000508514 SLC39A5Q6ZMH5 540 aa21.4■■□□□ 1.02
SKP2-204ENST00000508514 TINF2Q9BSI4 451 aa21.4■■□□□ 1.02
SKP2-204ENST00000508514 MTMR4Q9NYA4 1195 aa21.4■■□□□ 1.02
SKP2-204ENST00000508514 DIS3Q9Y2L1 958 aaKnown RBP21.4■■□□□ 1.02
SKP2-204ENST00000508514 ZNF865P0CJ78 1059 aaPredicted RBP21.39■■□□□ 1.01
SKP2-204ENST00000508514 SNX17Q15036 470 aa21.39■■□□□ 1.01
SKP2-204ENST00000508514 TACC3Q9Y6A5 838 aa21.39■■□□□ 1.01
SKP2-204ENST00000508514 ADCYAP1R1P41586 468 aa21.38■■□□□ 1.01
SKP2-204ENST00000508514 KCTD2Q14681 263 aa21.38■■□□□ 1.01
SKP2-204ENST00000508514 GPR153Q6NV75 609 aa21.38■■□□□ 1.01
SKP2-204ENST00000508514 Q7L0L9 218 aa21.38■■□□□ 1.01
SKP2-204ENST00000508514 ZNF444Q8N0Y2 327 aaPredicted RBP21.38■■□□□ 1.01
SKP2-204ENST00000508514 INCENPQ9NQS7 918 aa21.38■■□□□ 1.01
SKP2-204ENST00000508514 NRBP1Q9UHY1 535 aa21.38■■□□□ 1.01
SKP2-204ENST00000508514 SMCHD1A6NHR9 2005 aa21.38■■□□□ 1.01
SKP2-204ENST00000508514 LAMA2P24043 3122 aaKnown RBP21.37■■□□□ 1.01
SKP2-204ENST00000508514 DNAJC25-GNG10A0A024R161 153 aa21.37■■□□□ 1.01
SKP2-204ENST00000508514 ATP2A1O14983 1001 aa21.37■■□□□ 1.01
SKP2-204ENST00000508514 ERC2O15083 957 aa21.37■■□□□ 1.01
SKP2-204ENST00000508514 MX1P20591 662 aa21.37■■□□□ 1.01
SKP2-204ENST00000508514 RRP1P56182 461 aaKnown RBP21.37■■□□□ 1.01
SKP2-204ENST00000508514 SNRNP48Q6IEG0 339 aaKnown RBP21.37■■□□□ 1.01
SKP2-204ENST00000508514 CCDC129Q6ZRS4 1044 aa21.37■■□□□ 1.01
SKP2-204ENST00000508514 LRRC47Q8N1G4 583 aaKnown RBP21.37■■□□□ 1.01
SKP2-204ENST00000508514 PRPF38AQ8NAV1 312 aaKnown RBP21.37■■□□□ 1.01
SKP2-204ENST00000508514 NEDD1Q8NHV4 660 aa21.37■■□□□ 1.01
SKP2-204ENST00000508514 FERMT2Q96AC1 680 aa21.37■■□□□ 1.01
SKP2-204ENST00000508514 LENG1Q96BZ8 264 aaPredicted RBP21.37■■□□□ 1.01
SKP2-204ENST00000508514 FSD1Q9BTV5 496 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms