RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 ELP3Q9H9T3 547 aa9.57□□□□□ -0.88
SH3D19-208ENST00000508492 TLR7Q9NYK1 1049 aaKnown RBP9.57□□□□□ -0.88
SH3D19-208ENST00000508492 RFX7Q2KHR2 1363 aa9.57□□□□□ -0.88
SH3D19-208ENST00000508492 NAV1Q8NEY1 1877 aa9.57□□□□□ -0.88
SH3D19-208ENST00000508492 MAST3O60307 1309 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 SALL1Q9NSC2 1324 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 MYH8P13535 1937 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
SH3D19-208ENST00000508492 CA12O43570 354 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 LDHBP07195 334 aaKnown RBP9.56□□□□□ -0.88
SH3D19-208ENST00000508492 NR3C2P08235 984 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 MCAMP43121 646 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 C20orf194Q5TEA3 1177 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 CEP85Q6P2H3 762 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 HHIPL2Q6UWX4 724 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.56□□□□□ -0.88
SH3D19-208ENST00000508492 COL26A1Q96A83 441 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 DBNDD2Q9BQY9 259 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 MCOLN1Q9GZU1 580 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 HMG20BQ9P0W2 317 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 ABCF2Q9UG63 623 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 DENND2AQ9ULE3 1009 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 HDAC5Q9UQL6 1122 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 WASF2Q9Y6W5 498 aa9.56□□□□□ -0.88
SH3D19-208ENST00000508492 BAZ2AQ9UIF9 1905 aaKnown RBP9.56□□□□□ -0.88
SH3D19-208ENST00000508492 PPP1R12BO60237 982 aaPredicted RBP9.55□□□□□ -0.88
SH3D19-208ENST00000508492 SURF6O75683 361 aaKnown RBP9.55□□□□□ -0.88
SH3D19-208ENST00000508492 G3BP1Q13283 466 aaKnown RBP eCLIP9.55□□□□□ -0.88
SH3D19-208ENST00000508492 DGKZQ13574 1117 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 TNFAIP1Q13829 316 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 VGLL4Q14135 290 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 SUPT20HL1Q3ZLR7 823 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 TNNI3KQ59H18 835 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 OPTNQ96CV9 577 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 ETNK1Q9HBU6 452 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 GNL3LQ9NVN8 582 aaKnown RBP9.55□□□□□ -0.88
SH3D19-208ENST00000508492 SAGE1Q9NXZ1 904 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 SUGT1Q9Y2Z0 365 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 FPGT-TNNI3KV9GXZ4 949 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 GAKO14976 1311 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 DOCK3Q8IZD9 2030 aa9.55□□□□□ -0.88
SH3D19-208ENST00000508492 DDX60LQ5H9U9 1706 aaKnown RBP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 ATRNL1Q5VV63 1379 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 RPAP1Q9BWH6 1393 aaPredicted RBP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 ALDH1A1P00352 501 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 IREB2P48200 963 aaKnown RBP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 TM4SF4P48230 202 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 TNNI2P48788 182 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 CAP1Q01518 475 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 MECOMQ03112 1051 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 NNTQ13423 1086 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 OS9Q13438 667 aaPredicted RBP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 MVPQ14764 893 aaKnown RBP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 MIGA2Q7L4E1 593 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 ANKRD13AQ8IZ07 590 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 ZKSCAN4Q969J2 545 aaPredicted RBP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 PTPN18Q99952 460 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 CCDC8Q9H0W5 538 aaPredicted RBP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 DDX4Q9NQI0 724 aaKnown RBP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 USP40Q9NVE5 1235 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 RCAN3Q9UKA8 241 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 EXOC6BQ9Y2D4 811 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 AKAP2Q9Y2D5 859 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 SNCAIPQ9Y6H5 919 aa9.54□□□□□ -0.88
SH3D19-208ENST00000508492 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
SH3D19-208ENST00000508492 INPP5BP32019 993 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 BTDP43251 543 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 EPHA4P54764 986 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 PICALMQ13492 652 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 LAPTM4AQ15012 233 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 GORABQ5T7V8 394 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 FAM83AQ86UY5 434 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 DZIP1Q86YF9 867 aaKnown RBP9.53□□□□□ -0.88
SH3D19-208ENST00000508492 SIRT2Q8IXJ6 389 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 SPATA5Q8NB90 893 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
SH3D19-208ENST00000508492 ZNF296Q8WUU4 475 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-208ENST00000508492 EAF2Q96CJ1 260 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-208ENST00000508492 WRNIP1Q96S55 665 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 MRIQ9BWK5 157 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 TMOD2Q9NZR1 351 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-208ENST00000508492 DBNLQ9UJU6 430 aaKnown RBP9.53□□□□□ -0.88
SH3D19-208ENST00000508492 NOP58Q9Y2X3 529 aaKnown RBP9.53□□□□□ -0.88
SH3D19-208ENST00000508492 MROH7-TTC4A0A0A0MT08 1334 aa9.53□□□□□ -0.88
SH3D19-208ENST00000508492 PDS5AQ29RF7 1337 aaKnown RBP9.53□□□□□ -0.88
SH3D19-208ENST00000508492 LOC285556D6RIA3 1793 aa9.52□□□□□ -0.88
SH3D19-208ENST00000508492 CCDC85CA6NKD9 419 aa9.52□□□□□ -0.89
SH3D19-208ENST00000508492 WDHD1O75717 1129 aaPredicted RBP9.52□□□□□ -0.89
SH3D19-208ENST00000508492 ABL1P00519 1130 aa9.52□□□□□ -0.89
SH3D19-208ENST00000508492 ADH1AP07327 375 aa9.52□□□□□ -0.89
SH3D19-208ENST00000508492 ZBTB48P10074 688 aaPredicted RBP9.52□□□□□ -0.89
SH3D19-208ENST00000508492 ERCC3P19447 782 aa9.52□□□□□ -0.89
SH3D19-208ENST00000508492 RGS3P49796 1198 aa9.52□□□□□ -0.89
SH3D19-208ENST00000508492 RHBDL3P58872 404 aa9.52□□□□□ -0.89
SH3D19-208ENST00000508492 SREBF2Q12772 1141 aa9.52□□□□□ -0.89
SH3D19-208ENST00000508492 FKBP1CQ5VVH2 108 aa9.52□□□□□ -0.89
SH3D19-208ENST00000508492 ADGRA1Q86SQ6 560 aa9.52□□□□□ -0.89
SH3D19-208ENST00000508492 FAM151AQ8WW52 585 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms