RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 FMNL1O95466 1100 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 INPP5BP32019 993 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 STAT2P52630 851 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 LDLRAD1Q5T700 205 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 CDAN1Q8IWY9 1227 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 PROCA1Q8NCQ7 364 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 CCDC148Q8NFR7 591 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 C12orf42Q96LP6 360 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 BRMS1Q9HCU9 246 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 GPHNQ9NQX3 736 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 CHMP5Q9NZZ3 219 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 ORC3Q9UBD5 711 aaPredicted RBP16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 ZHX2Q9Y6X8 837 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 MYPNQ86TC9 1320 aa16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
HMGCLL1-208ENST00000508459 H3BQV1 296 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 RAD21O60216 631 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 ZBTB48P10074 688 aaPredicted RBP16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 YY1P25490 414 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 GJB2P29033 226 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 IKQ13123 557 aaPredicted RBP16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 SH3D19Q5HYK7 790 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 IFFO2Q5TF58 517 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 PRAMEF18Q5VWM3 479 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 MCTP2Q6DN12 878 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 GALNT17Q6IS24 598 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 LRRC47Q8N1G4 583 aaKnown RBP16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 NSUN7Q8NE18 718 aaKnown RBP16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 ZKSCAN4Q969J2 545 aaPredicted RBP16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 MAF1Q9H063 256 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 SH3GLB2Q9NR46 395 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 MAD2L2Q9UI95 211 aa16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
HMGCLL1-208ENST00000508459 NDUFB10O96000 172 aa16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 CALML3P27482 149 aa16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 ADD1P35611 737 aaKnown RBP16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 SPP2Q13103 211 aa16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 SNAPC2Q13487 334 aa16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 LARP1BQ659C4 914 aaKnown RBP16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 BTNL9Q6UXG8 535 aa16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 GTF3C2Q8WUA4 911 aaPredicted RBP16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 HHIPL1Q96JK4 782 aa16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 ZNF408Q9H9D4 720 aa16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 AFG3L2Q9Y4W6 797 aa16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 CTDP1Q9Y5B0 961 aaPredicted RBP16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 SNCAIPQ9Y6H5 919 aa16.68■□□□□ 0.26
HMGCLL1-208ENST00000508459 LARGE1O95461 756 aa16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 ITGBL1O95965 494 aaPredicted RBP16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 NTRK3Q16288 839 aa16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 PPP1R18Q6NYC8 613 aa16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 PRPF38AQ8NAV1 312 aaKnown RBP16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 LARP6Q9BRS8 491 aaKnown RBP16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 MYL10Q9BUA6 226 aa16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 SLC26A6Q9BXS9 759 aa16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 RIOX1Q9H6W3 641 aa16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 NCOA5Q9HCD5 579 aaKnown RBP16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 SCAF8Q9UPN6 1271 aaKnown RBP16.67■□□□□ 0.26
HMGCLL1-208ENST00000508459 CDC27P30260 824 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 GTF2A2P52657 109 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 PRKG1Q13976 671 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 RRP1BQ14684 758 aaKnown RBP16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 CCDC144CPQ8IYA2 1237 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 REM2Q8IYK8 340 aaPredicted RBP16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 C8orf76Q96K31 380 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 ZSCAN16Q9H4T2 348 aaPredicted RBP16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 SENP2Q9HC62 589 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 HOXC10Q9NYD6 342 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 PNMA3Q9UL41 463 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 KCNH4Q9UQ05 1017 aa16.66■□□□□ 0.26
HMGCLL1-208ENST00000508459 PNMA6FA0A0J9YX94 578 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 USP17L15C9J2P7 530 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 USP17L13C9JLJ4 530 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 USP17L11C9JVI0 530 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 USP17L18D6R9N7 530 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 USP17L22D6RA61 530 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 USP17L17D6RBQ6 530 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 USP17L19D6RCP7 530 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 USP17L20D6RJB6 530 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 CETPP11597 493 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 SCG2P13521 617 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 INHBEP58166 350 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 USP17L24Q0WX57 530 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 MTMR2Q13614 643 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 PFKFB3Q16875 520 aaPredicted RBP16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 MB21D1Q8N884 522 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 CCDC102AQ96A19 550 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 FAM217BQ9NTX9 383 aaPredicted RBP16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 SLC45A1Q9Y2W3 748 aa16.65■□□□□ 0.26
HMGCLL1-208ENST00000508459 MYH6P13533 1939 aa16.64■□□□□ 0.26
HMGCLL1-208ENST00000508459 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
HMGCLL1-208ENST00000508459 A0A0G2JLL6 359 aaPredicted RBP16.64■□□□□ 0.25
HMGCLL1-208ENST00000508459 A0A1W2PRG0 241 aa16.64■□□□□ 0.25
HMGCLL1-208ENST00000508459 TRIM75PA6NK02 468 aa16.64■□□□□ 0.25
HMGCLL1-208ENST00000508459 TMEM232C9JQI7 657 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms