RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 MAP4K4O95819 1239 aaPredicted RBP16.1■□□□□ 0.17
SGCA-206ENST00000508382 MECOMQ03112 1051 aa16.1■□□□□ 0.17
SGCA-206ENST00000508382 LRRC41Q15345 812 aa16.1■□□□□ 0.17
SGCA-206ENST00000508382 CCDC102BQ68D86 513 aa16.1■□□□□ 0.17
SGCA-206ENST00000508382 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
SGCA-206ENST00000508382 GNL3LQ9NVN8 582 aaKnown RBP16.1■□□□□ 0.17
SGCA-206ENST00000508382 BTBD7Q9P203 1132 aa16.1■□□□□ 0.17
SGCA-206ENST00000508382 C19orf81C9J6K1 198 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 USP17L10C9JJH3 530 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 ZBTB22O15209 634 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 GDF11O95390 407 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
SGCA-206ENST00000508382 CLTBP09497 229 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 HSPA4P34932 840 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 TFF2Q03403 129 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 WDR78Q5VTH9 848 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 CWC27Q6UX04 472 aaKnown RBP16.09■□□□□ 0.17
SGCA-206ENST00000508382 C16orf59Q7L2K0 433 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 KBTBD3Q8NAB2 608 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.09■□□□□ 0.17
SGCA-206ENST00000508382 C11orf16Q9NQ32 467 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
SGCA-206ENST00000508382 RABGAP1Q9Y3P9 1069 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 TACC3Q9Y6A5 838 aa16.09■□□□□ 0.17
SGCA-206ENST00000508382 TRANK1O15050 2925 aa16.08■□□□□ 0.17
SGCA-206ENST00000508382 MYO5AQ9Y4I1 1855 aaKnown RBP16.08■□□□□ 0.17
SGCA-206ENST00000508382 HSP90AA1P07900 732 aaKnown RBP16.08■□□□□ 0.16
SGCA-206ENST00000508382 ZFYP08048 801 aaPredicted RBP16.08■□□□□ 0.16
SGCA-206ENST00000508382 UQCRFS1P1P0C7P4 283 aa16.08■□□□□ 0.16
SGCA-206ENST00000508382 KCNQ1P51787 676 aa16.08■□□□□ 0.16
SGCA-206ENST00000508382 FPGSQ05932 587 aa16.08■□□□□ 0.16
SGCA-206ENST00000508382 FAM47AQ5JRC9 791 aa16.08■□□□□ 0.16
SGCA-206ENST00000508382 PRAMEF19Q5SWL8 479 aa16.08■□□□□ 0.16
SGCA-206ENST00000508382 RNF20Q5VTR2 975 aa16.08■□□□□ 0.16
SGCA-206ENST00000508382 ALYREFQ86V81 257 aaKnown RBP16.08■□□□□ 0.16
SGCA-206ENST00000508382 ZGPATQ8N5A5 531 aaKnown RBP16.08■□□□□ 0.16
SGCA-206ENST00000508382 GTF3C2Q8WUA4 911 aaPredicted RBP16.08■□□□□ 0.16
SGCA-206ENST00000508382 CWC22Q9HCG8 908 aaKnown RBP16.08■□□□□ 0.16
SGCA-206ENST00000508382 PAG1Q9NWQ8 432 aa16.08■□□□□ 0.16
SGCA-206ENST00000508382 HERC5Q9UII4 1024 aaKnown RBP16.08■□□□□ 0.16
SGCA-206ENST00000508382 HCN4Q9Y3Q4 1203 aa16.08■□□□□ 0.16
SGCA-206ENST00000508382 LRRC37A2A6NM11 1700 aa16.08■□□□□ 0.16
SGCA-206ENST00000508382 SEPT4O43236 478 aa16.07■□□□□ 0.16
SGCA-206ENST00000508382 ASNSP08243 561 aa16.07■□□□□ 0.16
SGCA-206ENST00000508382 RAG1P15918 1043 aa16.07■□□□□ 0.16
SGCA-206ENST00000508382 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
SGCA-206ENST00000508382 KHSRPQ92945 711 aaKnown RBP eCLIP16.07■□□□□ 0.16
SGCA-206ENST00000508382 DNAJC2Q99543 621 aaKnown RBP16.07■□□□□ 0.16
SGCA-206ENST00000508382 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
SGCA-206ENST00000508382 PHF24Q9UPV7 400 aa16.07■□□□□ 0.16
SGCA-206ENST00000508382 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.07■□□□□ 0.16
SGCA-206ENST00000508382 CCDC171Q6TFL3 1326 aa16.07■□□□□ 0.16
SGCA-206ENST00000508382 A0A0G2JMZ2 1700 aa16.07■□□□□ 0.16
SGCA-206ENST00000508382 PDS5AQ29RF7 1337 aaKnown RBP16.06■□□□□ 0.16
SGCA-206ENST00000508382 TTF1Q15361 905 aaPredicted RBP16.06■□□□□ 0.16
SGCA-206ENST00000508382 RASIP1Q5U651 963 aa16.06■□□□□ 0.16
SGCA-206ENST00000508382 ZSCAN25Q6NSZ9 544 aa16.06■□□□□ 0.16
SGCA-206ENST00000508382 SLF2Q8IX21 1173 aa16.06■□□□□ 0.16
SGCA-206ENST00000508382 XAGE2Q96GT9 111 aa16.06■□□□□ 0.16
SGCA-206ENST00000508382 CHMP5Q9NZZ3 219 aa16.06■□□□□ 0.16
SGCA-206ENST00000508382 CXXC1Q9P0U4 656 aaPredicted RBP16.06■□□□□ 0.16
SGCA-206ENST00000508382 HMG20BQ9P0W2 317 aa16.06■□□□□ 0.16
SGCA-206ENST00000508382 ZBTB21Q9ULJ3 1066 aa16.06■□□□□ 0.16
SGCA-206ENST00000508382 PQBP1O60828 265 aaKnown RBP16.05■□□□□ 0.16
SGCA-206ENST00000508382 COBLO75128 1261 aa16.05■□□□□ 0.16
SGCA-206ENST00000508382 IGFBP4P22692 258 aa16.05■□□□□ 0.16
SGCA-206ENST00000508382 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
SGCA-206ENST00000508382 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
SGCA-206ENST00000508382 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
SGCA-206ENST00000508382 SH3RF3Q8TEJ3 882 aaPredicted RBP16.05■□□□□ 0.16
SGCA-206ENST00000508382 NSUN4Q96CB9 384 aaKnown RBP16.05■□□□□ 0.16
SGCA-206ENST00000508382 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.05■□□□□ 0.16
SGCA-206ENST00000508382 HELLSQ9NRZ9 838 aa16.05■□□□□ 0.16
SGCA-206ENST00000508382 PI4KBQ9UBF8 816 aa16.05■□□□□ 0.16
SGCA-206ENST00000508382 PRRC2BQ5JSZ5 2229 aaKnown RBP16.04■□□□□ 0.16
SGCA-206ENST00000508382 MYH1P12882 1939 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 TIMM10P62072 90 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 CCNA1P78396 465 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 ZYXQ15942 572 aaKnown RBP16.04■□□□□ 0.16
SGCA-206ENST00000508382 TMEM240Q5SV17 173 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 USP17L2Q6R6M4 530 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 PI16Q6UXB8 463 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 CATSPERGQ6ZRH7 1159 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 TEX11Q8IYF3 940 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 SNX27Q96L92 541 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 C12orf42Q96LP6 360 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 TM6SF1Q9BZW5 370 aa16.04■□□□□ 0.16
SGCA-206ENST00000508382 PARP14Q460N5 1801 aa16.03■□□□□ 0.16
SGCA-206ENST00000508382 SPDYE16A6NNV3 312 aaPredicted RBP16.03■□□□□ 0.16
SGCA-206ENST00000508382 ADORA2AP29274 412 aa16.03■□□□□ 0.16
SGCA-206ENST00000508382 KRT32Q14532 448 aa16.03■□□□□ 0.16
SGCA-206ENST00000508382 MCMDC2Q4G0Z9 681 aa16.03■□□□□ 0.16
SGCA-206ENST00000508382 LBX2Q6XYB7 198 aa16.03■□□□□ 0.16
SGCA-206ENST00000508382 KCNB2Q92953 911 aa16.03■□□□□ 0.16
SGCA-206ENST00000508382 TMEM39AQ9NV64 488 aa16.03■□□□□ 0.16
SGCA-206ENST00000508382 IVNS1ABPQ9Y6Y0 642 aa16.03■□□□□ 0.16
SGCA-206ENST00000508382 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
SGCA-206ENST00000508382 A0A1W2PQ45 241 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms