RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 OSBPL5Q9H0X9 879 aaPredicted RBP3.36□□□□□ -1.87
NEDD4-208ENST00000508342 IGFLR1Q9H665 355 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 FBXL21Q9UKT6 434 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 FZD1Q9UP38 647 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 DENND3A2RUS2 1198 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 RNF113AO15541 343 aaKnown RBP3.36□□□□□ -1.87
NEDD4-208ENST00000508342 CBFA2T2O43439 604 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 CCL5P13501 91 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 TNNI3KQ59H18 835 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 NOP9Q86U38 636 aaKnown RBP3.36□□□□□ -1.87
NEDD4-208ENST00000508342 CDAN1Q8IWY9 1227 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 CCDC112Q8NEF3 446 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 MORC4Q8TE76 937 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 SH3TC2Q8TF17 1288 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 GTF3C6Q969F1 213 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 FAM161BQ96MY7 647 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 SLF1Q9BQI6 1058 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 TSPYL1Q9H0U9 437 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 ENTPD7Q9NQZ7 604 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 AKT3Q9Y243 479 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 FPGT-TNNI3KV9GXZ4 949 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 UPP2O95045 317 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 ABL2P42684 1182 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 HSP90AA2PQ14568 343 aaPredicted RBP3.36□□□□□ -1.87
NEDD4-208ENST00000508342 G2E3Q7L622 706 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 GCNAQ96QF7 691 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 DEF6Q9H4E7 631 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 GOLGA4Q13439 2230 aaKnown RBP3.36□□□□□ -1.87
NEDD4-208ENST00000508342 WDR90Q96KV7 1748 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 ZBED9Q6R2W3 1325 aa3.36□□□□□ -1.87
NEDD4-208ENST00000508342 QSER1Q2KHR3 1735 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 GOLGA8AA7E2F4 631 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 GOLGA8BA8MQT2 603 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 GNRH1P01148 92 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 MAP2K2P36507 400 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 TERF1P54274 439 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 CTDSPL2Q05D32 466 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 LRRC24Q50LG9 513 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 NOM1Q5C9Z4 860 aaKnown RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 FCHSD1Q86WN1 690 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 KLHDC4Q8TBB5 520 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 ARMC5Q96C12 935 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 NAT10Q9H0A0 1025 aaKnown RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 DKK3Q9UBP4 350 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 POLLQ9UGP5 575 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 MRPL11Q9Y3B7 192 aaKnown RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 BCORQ6W2J9 1755 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 MYO9BQ13459 2157 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 ONECUT3O60422 494 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SNAP25P60880 206 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 PTPN12Q05209 780 aaKnown RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 MIS18BP1Q6P0N0 1132 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 RNPC3Q96LT9 517 aaKnown RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 RBM19Q9Y4C8 960 aaKnown RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 ZNF532Q9HCE3 1301 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 IRS2Q9Y4H2 1338 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 MED23Q9ULK4 1368 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SPDYE2BA6NHP3 402 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 ASNSP08243 561 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SPDYE6P0CI01 402 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 RAG1P15918 1043 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 PDCP20941 246 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 HMGCS2P54868 508 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 MDM2Q00987 491 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 CETN1Q12798 172 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SPDYE2Q495Y8 402 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 KCTD1Q719H9 257 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 ERO1BQ86YB8 467 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 RASAL3Q86YV0 1011 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 YAF2Q8IY57 180 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 GLG1Q92896 1179 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SMARCE1Q969G3 411 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 ZKSCAN3Q9BRR0 538 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 TCHPQ9BT92 498 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 KATNAL1Q9BW62 490 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 FOXN1O15353 648 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 NTSR2O95665 410 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 BRD1O95696 1058 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 CFBP00751 764 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 CXCL9Q07325 125 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 RUFY4Q6ZNE9 571 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 CAGE1Q8TC20 777 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 CPLX3Q8WVH0 158 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 PNMA2Q9UL42 364 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 KDM6AO15550 1401 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 MROH7Q68CQ1 1323 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SYNRGQ9UMZ2 1314 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 COL18A1P39060 1754 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 C19orf81C9J6K1 198 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 GCOM1H8Y6P7 765 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 CHMP2AO43633 222 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SLU7O95391 586 aaKnown RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 POLR2MP0CAP2 368 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 RRP1P56182 461 aaKnown RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 TIMM10P62072 90 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 NUCB2P80303 420 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 FAM47AQ5JRC9 791 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 FAM83BQ5T0W9 1011 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 TXLNBQ8N3L3 684 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SSH1Q8WYL5 1049 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms