RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 DAGLBQ8NCG7 672 aa8.33□□□□□ -1.08
DHFR-204ENST00000508282 SHDQ96IW2 340 aa8.33□□□□□ -1.08
DHFR-204ENST00000508282 FMNL2Q96PY5 1086 aa8.33□□□□□ -1.08
DHFR-204ENST00000508282 TMEM59LQ9UK28 342 aa8.33□□□□□ -1.08
DHFR-204ENST00000508282 MINPP1Q9UNW1 487 aa8.33□□□□□ -1.08
DHFR-204ENST00000508282 RNF114Q9Y508 228 aa8.33□□□□□ -1.08
DHFR-204ENST00000508282 SHOXO15266 292 aa8.32□□□□□ -1.08
DHFR-204ENST00000508282 SIGLEC6O43699 453 aa8.32□□□□□ -1.08
DHFR-204ENST00000508282 TEKQ02763 1124 aa8.32□□□□□ -1.08
DHFR-204ENST00000508282 AUHQ13825 339 aaKnown RBP8.32□□□□□ -1.08
DHFR-204ENST00000508282 TDRD10Q5VZ19 366 aaKnown RBP8.32□□□□□ -1.08
DHFR-204ENST00000508282 USHBP1Q8N6Y0 703 aa8.32□□□□□ -1.08
DHFR-204ENST00000508282 FAM168AQ92567 244 aa8.32□□□□□ -1.08
DHFR-204ENST00000508282 TCTN2Q96GX1 697 aa8.32□□□□□ -1.08
DHFR-204ENST00000508282 CCDC120Q96HB5 630 aa8.32□□□□□ -1.08
DHFR-204ENST00000508282 IGSF5Q9NSI5 407 aa8.32□□□□□ -1.08
DHFR-204ENST00000508282 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.32□□□□□ -1.08
DHFR-204ENST00000508282 LTBP3Q9NS15 1303 aa8.31□□□□□ -1.08
DHFR-204ENST00000508282 AFMP43652 599 aa8.31□□□□□ -1.08
DHFR-204ENST00000508282 HK2P52789 917 aa8.31□□□□□ -1.08
DHFR-204ENST00000508282 CCDC144CPQ8IYA2 1237 aa8.31□□□□□ -1.08
DHFR-204ENST00000508282 ZNF655Q8N720 491 aaPredicted RBP8.31□□□□□ -1.08
DHFR-204ENST00000508282 OR6P1Q8NGX9 317 aa8.31□□□□□ -1.08
DHFR-204ENST00000508282 GFOD1Q9NXC2 390 aa8.31□□□□□ -1.08
DHFR-204ENST00000508282 PCDHB12Q9Y5F1 795 aa8.31□□□□□ -1.08
DHFR-204ENST00000508282 ZGLP1P0C6A0 271 aa8.3□□□□□ -1.08
DHFR-204ENST00000508282 ATF4P18848 351 aaPredicted RBP8.3□□□□□ -1.08
DHFR-204ENST00000508282 ERVFC1P60507 584 aa8.3□□□□□ -1.08
DHFR-204ENST00000508282 AXDND1Q5T1B0 1012 aaPredicted RBP8.3□□□□□ -1.08
DHFR-204ENST00000508282 C7orf61Q8IZ16 206 aa8.3□□□□□ -1.08
DHFR-204ENST00000508282 CPLX3Q8WVH0 158 aa8.3□□□□□ -1.08
DHFR-204ENST00000508282 CHST7Q9NS84 486 aa8.3□□□□□ -1.08
DHFR-204ENST00000508282 FBXL21Q9UKT6 434 aa8.3□□□□□ -1.08
DHFR-204ENST00000508282 ZNF214Q9UL59 606 aaPredicted RBP8.3□□□□□ -1.08
DHFR-204ENST00000508282 ZNF281Q9Y2X9 895 aa8.3□□□□□ -1.08
DHFR-204ENST00000508282 A0A1W2PQH9 124 aa8.29□□□□□ -1.08
DHFR-204ENST00000508282 DCAF15Q66K64 600 aa8.29□□□□□ -1.08
DHFR-204ENST00000508282 RNF111Q6ZNA4 994 aa8.29□□□□□ -1.08
DHFR-204ENST00000508282 ZSWIM9Q86XI8 627 aa8.29□□□□□ -1.08
DHFR-204ENST00000508282 C19orf47Q8N9M1 422 aaKnown RBP8.29□□□□□ -1.08
DHFR-204ENST00000508282 KIRREL1Q96J84 757 aa8.29□□□□□ -1.08
DHFR-204ENST00000508282 FOXP3Q9BZS1 431 aa8.29□□□□□ -1.08
DHFR-204ENST00000508282 CAPN10Q9HC96 672 aa8.29□□□□□ -1.08
DHFR-204ENST00000508282 FAM86C1Q9NVL1 165 aa8.29□□□□□ -1.08
DHFR-204ENST00000508282 EBF1Q9UH73 591 aa8.29□□□□□ -1.08
DHFR-204ENST00000508282 E9PSI1 815 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 TP53P04637 393 aaPredicted RBP8.28□□□□□ -1.08
DHFR-204ENST00000508282 KCNMB1Q16558 191 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 BBS9Q3SYG4 887 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 ANKRD39Q53RE8 183 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 FAM169BQ8N8A8 192 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 LINC00116Q8NCU8 138 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 SMARCC1Q92922 1105 aaPredicted RBP8.28□□□□□ -1.08
DHFR-204ENST00000508282 TINF2Q9BSI4 451 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 SP110Q9HB58 689 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 TCFL5Q9UL49 500 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 STRIP2Q9ULQ0 834 aa8.28□□□□□ -1.08
DHFR-204ENST00000508282 MEIS1O00470 390 aa8.27□□□□□ -1.09
DHFR-204ENST00000508282 HPXP02790 462 aa8.27□□□□□ -1.09
DHFR-204ENST00000508282 CTSKP43235 329 aa8.27□□□□□ -1.09
DHFR-204ENST00000508282 PCBP3P57721 371 aaKnown RBP8.27□□□□□ -1.09
DHFR-204ENST00000508282 G6PC3Q9BUM1 346 aa8.27□□□□□ -1.09
DHFR-204ENST00000508282 PRR13Q9NZ81 148 aa8.27□□□□□ -1.09
DHFR-204ENST00000508282 TMEM82A0PJX8 343 aa8.26□□□□□ -1.09
DHFR-204ENST00000508282 ZNF503-AS2A6NEH8 195 aa8.26□□□□□ -1.09
DHFR-204ENST00000508282 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.26□□□□□ -1.09
DHFR-204ENST00000508282 SYPP08247 313 aa8.26□□□□□ -1.09
DHFR-204ENST00000508282 TRHRP34981 398 aaPredicted RBP8.26□□□□□ -1.09
DHFR-204ENST00000508282 PDZD8Q8NEN9 1154 aa8.26□□□□□ -1.09
DHFR-204ENST00000508282 LINC01599Q8WXQ3 324 aa8.26□□□□□ -1.09
DHFR-204ENST00000508282 ANAPC16Q96DE5 110 aa8.26□□□□□ -1.09
DHFR-204ENST00000508282 PHAXQ9H814 394 aaKnown RBP8.26□□□□□ -1.09
DHFR-204ENST00000508282 PCDHB10Q9UN67 800 aa8.26□□□□□ -1.09
DHFR-204ENST00000508282 SLC12A7Q9Y666 1083 aa8.26□□□□□ -1.09
DHFR-204ENST00000508282 CBFA2T2O43439 604 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 GLI1P08151 1106 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 RAC2P15153 192 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 RPL10P27635 214 aaKnown RBP8.25□□□□□ -1.09
DHFR-204ENST00000508282 CASP7P55210 303 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 ZNF445P59923 1031 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 VPS37DQ86XT2 251 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 ABHD4Q8TB40 342 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 MYLIPQ8WY64 445 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 DHX38Q92620 1227 aaKnown RBP8.25□□□□□ -1.09
DHFR-204ENST00000508282 SYTL4Q96C24 671 aaPredicted RBP8.25□□□□□ -1.09
DHFR-204ENST00000508282 GP6Q9HCN6 339 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.25□□□□□ -1.09
DHFR-204ENST00000508282 ZNF451Q9Y4E5 1061 aa8.25□□□□□ -1.09
DHFR-204ENST00000508282 SSU72P8A0A1W2PR75 194 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 FKTNO75072 461 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 CD247P20963 164 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 BMP8BP34820 402 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 PPP2R5EQ16537 467 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 GNPTABQ3T906 1256 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 TIGD5Q53EQ6 642 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 OGFOD2Q6N063 350 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 CRTC3Q6UUV7 619 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 ZPBP2Q6X784 338 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 WAPLQ7Z5K2 1190 aa8.24□□□□□ -1.09
DHFR-204ENST00000508282 KLHL6Q8WZ60 621 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms