RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 TNPO2O14787 897 aaKnown RBP26.3■■□□□ 1.8
SNCB-204ENST00000508006 EEF2P13639 858 aaKnown RBP26.3■■□□□ 1.8
SNCB-204ENST00000508006 CCDC84Q86UT8 332 aaPredicted RBP26.3■■□□□ 1.8
SNCB-204ENST00000508006 DGKHQ86XP1 1220 aa26.3■■□□□ 1.8
SNCB-204ENST00000508006 SIAH1Q8IUQ4 282 aa26.3■■□□□ 1.8
SNCB-204ENST00000508006 PROCA1Q8NCQ7 364 aaPredicted RBP26.3■■□□□ 1.8
SNCB-204ENST00000508006 SLC45A1Q9Y2W3 748 aa26.3■■□□□ 1.8
SNCB-204ENST00000508006 SNX14Q9Y5W7 946 aa26.3■■□□□ 1.8
SNCB-204ENST00000508006 TRIOBPQ9H2D6 2365 aa26.3■■□□□ 1.8
SNCB-204ENST00000508006 FLT3LGP49771 235 aa26.29■■□□□ 1.8
SNCB-204ENST00000508006 USP17L2Q6R6M4 530 aa26.29■■□□□ 1.8
SNCB-204ENST00000508006 MB21D2Q8IYB1 491 aaPredicted RBP26.29■■□□□ 1.8
SNCB-204ENST00000508006 C12orf42Q96LP6 360 aa26.29■■□□□ 1.8
SNCB-204ENST00000508006 NEK1Q96PY6 1258 aa26.29■■□□□ 1.8
SNCB-204ENST00000508006 UNC93B1Q9H1C4 597 aa26.29■■□□□ 1.8
SNCB-204ENST00000508006 RBM27Q9P2N5 1060 aaKnown RBP26.29■■□□□ 1.8
SNCB-204ENST00000508006 FARP2O94887 1054 aaPredicted RBP26.28■■□□□ 1.8
SNCB-204ENST00000508006 SGPL1O95470 568 aa26.28■■□□□ 1.8
SNCB-204ENST00000508006 TFRCP02786 760 aaKnown RBP26.28■■□□□ 1.8
SNCB-204ENST00000508006 PSMA5P28066 241 aa26.28■■□□□ 1.8
SNCB-204ENST00000508006 MCM5P33992 734 aa26.28■■□□□ 1.8
SNCB-204ENST00000508006 SART3Q15020 963 aaKnown RBP26.28■■□□□ 1.8
SNCB-204ENST00000508006 ZSCAN10Q96SZ4 725 aaPredicted RBP26.28■■□□□ 1.8
SNCB-204ENST00000508006 FEZ1Q99689 392 aa26.28■■□□□ 1.8
SNCB-204ENST00000508006 UBAC1Q9BSL1 405 aa26.28■■□□□ 1.8
SNCB-204ENST00000508006 UPF2Q9HAU5 1272 aaKnown RBP26.28■■□□□ 1.8
SNCB-204ENST00000508006 WDR19Q8NEZ3 1342 aa26.28■■□□□ 1.8
SNCB-204ENST00000508006 A0A1W2PRG0 241 aa26.27■■□□□ 1.8
SNCB-204ENST00000508006 MTMR2Q13614 643 aa26.27■■□□□ 1.8
SNCB-204ENST00000508006 ANKS1AQ92625 1134 aa26.27■■□□□ 1.8
SNCB-204ENST00000508006 LPAR1Q92633 364 aa26.27■■□□□ 1.8
SNCB-204ENST00000508006 IL17RAQ96F46 866 aa26.27■■□□□ 1.8
SNCB-204ENST00000508006 BACH2Q9BYV9 841 aa26.27■■□□□ 1.8
SNCB-204ENST00000508006 TMOD4Q9NZQ9 345 aa26.27■■□□□ 1.8
SNCB-204ENST00000508006 CLIP2Q9UDT6 1046 aa26.27■■□□□ 1.8
SNCB-204ENST00000508006 ELNP15502 786 aa26.26■■□□□ 1.79
SNCB-204ENST00000508006 ACER1Q8TDN7 264 aa26.26■■□□□ 1.79
SNCB-204ENST00000508006 COA7Q96BR5 231 aa26.26■■□□□ 1.79
SNCB-204ENST00000508006 TM6SF1Q9BZW5 370 aa26.26■■□□□ 1.79
SNCB-204ENST00000508006 GOPCQ9HD26 462 aa26.26■■□□□ 1.79
SNCB-204ENST00000508006 STX8Q9UNK0 236 aa26.26■■□□□ 1.79
SNCB-204ENST00000508006 ERICH2A1L162 156 aa26.25■■□□□ 1.79
SNCB-204ENST00000508006 HMGCS2P54868 508 aa26.25■■□□□ 1.79
SNCB-204ENST00000508006 ADCK5Q3MIX3 580 aa26.25■■□□□ 1.79
SNCB-204ENST00000508006 CYB5R4Q7L1T6 521 aa26.25■■□□□ 1.79
SNCB-204ENST00000508006 UBE2Q1Q7Z7E8 422 aa26.25■■□□□ 1.79
SNCB-204ENST00000508006 CLEC10AQ8IUN9 316 aa26.25■■□□□ 1.79
SNCB-204ENST00000508006 PXYLP1Q8TE99 480 aa26.25■■□□□ 1.79
SNCB-204ENST00000508006 TMEM87BQ96K49 555 aa26.25■■□□□ 1.79
SNCB-204ENST00000508006 VCPKMTQ9H867 229 aa26.25■■□□□ 1.79
SNCB-204ENST00000508006 TNKSO95271 1327 aa26.24■■□□□ 1.79
SNCB-204ENST00000508006 NMT2O60551 498 aa26.24■■□□□ 1.79
SNCB-204ENST00000508006 INHAP05111 366 aa26.24■■□□□ 1.79
SNCB-204ENST00000508006 TOP1P11387 765 aaKnown RBP26.24■■□□□ 1.79
SNCB-204ENST00000508006 ATP2B2Q01814 1243 aa26.24■■□□□ 1.79
SNCB-204ENST00000508006 RCSD1Q6JBY9 416 aa26.24■■□□□ 1.79
SNCB-204ENST00000508006 DHX32Q7L7V1 743 aaKnown RBP26.24■■□□□ 1.79
SNCB-204ENST00000508006 ANKRD13CQ8N6S4 541 aa26.24■■□□□ 1.79
SNCB-204ENST00000508006 GMCL1P1Q8NEA9 526 aa26.24■■□□□ 1.79
SNCB-204ENST00000508006 PNMA3Q9UL41 463 aa26.24■■□□□ 1.79
SNCB-204ENST00000508006 AGTPBP1Q9UPW5 1226 aa26.24■■□□□ 1.79
SNCB-204ENST00000508006 EVI5O60447 810 aa26.23■■□□□ 1.79
SNCB-204ENST00000508006 CAPN2P17655 700 aa26.23■■□□□ 1.79
SNCB-204ENST00000508006 PABPC4Q13310 644 aaKnown RBP eCLIP26.23■■□□□ 1.79
SNCB-204ENST00000508006 IRF5Q13568 498 aa26.23■■□□□ 1.79
SNCB-204ENST00000508006 TMTC2Q8N394 836 aa26.23■■□□□ 1.79
SNCB-204ENST00000508006 ENAHQ8N8S7 591 aaPredicted RBP26.23■■□□□ 1.79
SNCB-204ENST00000508006 DEFB118Q96PH6 123 aa26.23■■□□□ 1.79
SNCB-204ENST00000508006 EMILIN3Q9NT22 766 aa26.23■■□□□ 1.79
SNCB-204ENST00000508006 PRC1O43663 620 aa26.22■■□□□ 1.79
SNCB-204ENST00000508006 ANTXR2P58335 489 aa26.22■■□□□ 1.79
SNCB-204ENST00000508006 SEC23AQ15436 765 aa26.22■■□□□ 1.79
SNCB-204ENST00000508006 BLOC1S2Q6QNY1 142 aa26.22■■□□□ 1.79
SNCB-204ENST00000508006 JAKMIP1Q96N16 626 aaKnown RBP26.22■■□□□ 1.79
SNCB-204ENST00000508006 ZKSCAN3Q9BRR0 538 aa26.22■■□□□ 1.79
SNCB-204ENST00000508006 IFIT3O14879 490 aaKnown RBP26.21■■□□□ 1.79
SNCB-204ENST00000508006 EXOSC10Q01780 885 aaKnown RBP26.21■■□□□ 1.79
SNCB-204ENST00000508006 IGDCC4Q8TDY8 1250 aa26.21■■□□□ 1.79
SNCB-204ENST00000508006 TMEM47Q9BQJ4 181 aa26.21■■□□□ 1.79
SNCB-204ENST00000508006 F5H6K3 240 aa26.2■■□□□ 1.78
SNCB-204ENST00000508006 HOXA7P31268 230 aaPredicted RBP26.2■■□□□ 1.78
SNCB-204ENST00000508006 LIFRP42702 1097 aa26.2■■□□□ 1.78
SNCB-204ENST00000508006 RBM25P49756 843 aaKnown RBP26.2■■□□□ 1.78
SNCB-204ENST00000508006 KLRC3Q07444 240 aa26.2■■□□□ 1.78
SNCB-204ENST00000508006 IFIT1BQ5T764 474 aaKnown RBP26.2■■□□□ 1.78
SNCB-204ENST00000508006 FBXL16Q8N461 479 aa26.2■■□□□ 1.78
SNCB-204ENST00000508006 C22orf23Q9BZE7 217 aa26.2■■□□□ 1.78
SNCB-204ENST00000508006 ZSWIM6Q9HCJ5 1215 aa26.2■■□□□ 1.78
SNCB-204ENST00000508006 WDR46O15213 610 aaKnown RBP26.19■■□□□ 1.78
SNCB-204ENST00000508006 WTAPQ15007 396 aa26.19■■□□□ 1.78
SNCB-204ENST00000508006 ZYXQ15942 572 aaKnown RBP26.19■■□□□ 1.78
SNCB-204ENST00000508006 TMEM67Q5HYA8 995 aa26.19■■□□□ 1.78
SNCB-204ENST00000508006 TREML2Q5T2D2 321 aa26.19■■□□□ 1.78
SNCB-204ENST00000508006 IL27Q8NEV9 243 aa26.19■■□□□ 1.78
SNCB-204ENST00000508006 GMCL1Q96IK5 515 aa26.19■■□□□ 1.78
SNCB-204ENST00000508006 KAT14Q9H8E8 782 aa26.19■■□□□ 1.78
SNCB-204ENST00000508006 VCAM1P19320 739 aa26.18■■□□□ 1.78
SNCB-204ENST00000508006 CASTP20810 708 aaKnown RBP26.18■■□□□ 1.78
SNCB-204ENST00000508006 FAM110CQ1W6H9 321 aa26.18■■□□□ 1.78
SNCB-204ENST00000508006 RUFY3Q7L099 469 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms