RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 CEP131Q9UPN4 1083 aa4.34□□□□□ -1.71
CCDC30-212ENST00000507855 MAPK8IP1Q9UQF2 711 aa4.34□□□□□ -1.71
CCDC30-212ENST00000507855 ZNF451Q9Y4E5 1061 aa4.34□□□□□ -1.71
CCDC30-212ENST00000507855 ADAMTS4O75173 837 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 FSTP19883 344 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 YARSP54577 528 aaKnown RBP4.34□□□□□ -1.72
CCDC30-212ENST00000507855 TNK2Q07912 1038 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 MAP7Q14244 749 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 GNPTABQ3T906 1256 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 YOD1Q5VVQ6 348 aaPredicted RBP4.34□□□□□ -1.72
CCDC30-212ENST00000507855 SPTY2D1Q68D10 685 aaPredicted RBP4.34□□□□□ -1.72
CCDC30-212ENST00000507855 OGFOD3Q6PK18 319 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 PAOXQ6QHF9 649 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 NBPF11Q86T75 865 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 ALYREFQ86V81 257 aaKnown RBP4.34□□□□□ -1.72
CCDC30-212ENST00000507855 FAM43AQ8N2R8 423 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 ZNF513Q8N8E2 541 aaPredicted RBP4.34□□□□□ -1.72
CCDC30-212ENST00000507855 SPATA32Q96LK8 384 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 SNTG2Q9NY99 539 aa4.34□□□□□ -1.72
CCDC30-212ENST00000507855 HSP90AA1P07900 732 aaKnown RBP4.33□□□□□ -1.72
CCDC30-212ENST00000507855 SF3A1Q15459 793 aaKnown RBP4.33□□□□□ -1.72
CCDC30-212ENST00000507855 SF1Q15637 639 aaKnown RBP4.33□□□□□ -1.72
CCDC30-212ENST00000507855 CDKAL1Q5VV42 579 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 RINLQ6ZS11 566 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 LILRB2Q8N423 598 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 NME8Q8N427 588 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 TTC36A6NLP5 189 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 EIF4EBP3O60516 100 aaPredicted RBP4.33□□□□□ -1.72
CCDC30-212ENST00000507855 OXCT1P55809 520 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 INTS3Q68E01 1043 aaKnown RBP4.33□□□□□ -1.72
CCDC30-212ENST00000507855 JAZF1Q86VZ6 243 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 FAM178BQ8IXR5 827 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 MFSD2AQ8NA29 543 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 BORCS6Q96GS4 357 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 PRDM14Q9GZV8 571 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 SUCOQ9UBS9 1254 aaKnown RBP4.33□□□□□ -1.72
CCDC30-212ENST00000507855 RPS6KL1Q9Y6S9 549 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 WASHC2AQ641Q2 1341 aa4.33□□□□□ -1.72
CCDC30-212ENST00000507855 CLEC3AO75596 197 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 FOXB2Q5VYV0 432 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 ZPBP2Q6X784 338 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 NFXL1Q6ZNB6 911 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 SPACA3Q8IXA5 215 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 NLGN1Q8N2Q7 840 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 DTWD2Q8NBA8 298 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 CHMP4CQ96CF2 233 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 DNAJC7Q99615 494 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 HAUS7Q99871 368 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 MCMBPQ9BTE3 642 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 MKRN2Q9H000 416 aaKnown RBP4.32□□□□□ -1.72
CCDC30-212ENST00000507855 ZC3H7BQ9UGR2 993 aaKnown RBP4.32□□□□□ -1.72
CCDC30-212ENST00000507855 STRIP2Q9ULQ0 834 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 DCAF1Q9Y4B6 1507 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 K7ELQ4 463 aaPredicted RBP4.32□□□□□ -1.72
CCDC30-212ENST00000507855 IMPDH2P12268 514 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 CTSKP43235 329 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 BNIP3Q12983 259 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 TSHZ1Q6ZSZ6 1077 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 TRIM55Q9BYV6 548 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 ZHX1Q9UKY1 873 aaPredicted RBP4.32□□□□□ -1.72
CCDC30-212ENST00000507855 MSRB2Q9Y3D2 182 aa4.32□□□□□ -1.72
CCDC30-212ENST00000507855 IGLV1-40P01703 118 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 PMS1P54277 932 aaKnown RBP4.31□□□□□ -1.72
CCDC30-212ENST00000507855 CYP4F3Q08477 520 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 LRRFIP1Q32MZ4 808 aaKnown RBP4.31□□□□□ -1.72
CCDC30-212ENST00000507855 NBPF9Q3BBW0 867 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 ZNF574Q6ZN55 896 aaPredicted RBP4.31□□□□□ -1.72
CCDC30-212ENST00000507855 WFDC3Q8IUB2 231 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 CKAP2LQ8IYA6 745 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 SRPK1Q96SB4 655 aaKnown RBP4.31□□□□□ -1.72
CCDC30-212ENST00000507855 OSBPL2Q9H1P3 480 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 PRDM5Q9NQX1 630 aaPredicted RBP4.31□□□□□ -1.72
CCDC30-212ENST00000507855 GFOD1Q9NXC2 390 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 MRPL42Q9Y6G3 142 aaKnown RBP4.31□□□□□ -1.72
CCDC30-212ENST00000507855 ZNF445P59923 1031 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 AUHQ13825 339 aaKnown RBP4.31□□□□□ -1.72
CCDC30-212ENST00000507855 EP400NLQ6ZTU2 488 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 KCT2Q8NC54 265 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 HSPA12BQ96MM6 686 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 DEPDC7Q96QD5 511 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 KLHL25Q9H0H3 589 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 DUSP15Q9H1R2 295 aaPredicted RBP4.31□□□□□ -1.72
CCDC30-212ENST00000507855 PRDM7Q9NQW5 492 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 ST14Q9Y5Y6 855 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 CAPN6Q9Y6Q1 641 aa4.31□□□□□ -1.72
CCDC30-212ENST00000507855 H3BS24 57 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 SMARCA5O60264 1052 aaPredicted RBP4.3□□□□□ -1.72
CCDC30-212ENST00000507855 SLC10A6Q3KNW5 377 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 CC2D1BQ5T0F9 858 aaKnown RBP4.3□□□□□ -1.72
CCDC30-212ENST00000507855 CCDC144CPQ8IYA2 1237 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 TAB3Q8N5C8 712 aaPredicted RBP4.3□□□□□ -1.72
CCDC30-212ENST00000507855 C19orf47Q8N9M1 422 aaKnown RBP4.3□□□□□ -1.72
CCDC30-212ENST00000507855 DBNDD2Q9BQY9 259 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 ATP13A1Q9HD20 1204 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 STK26Q9P289 416 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 KAT6BQ8WYB5 2073 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 ARNTLO00327 626 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 VAMP4O75379 141 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 PRAMEF1O95521 474 aa4.3□□□□□ -1.72
CCDC30-212ENST00000507855 H2AFB1P0C5Y9 115 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms