RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 TEKT1Q969V4 418 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 ZDHHC15Q96MV8 337 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 SERTAD1Q9UHV2 236 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 KLRF2D3W0D1 207 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 MYO1BO43795 1136 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 PTGS1P23219 599 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 SLC15A2Q16348 729 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 ARL6IP4Q66PJ3 421 aaKnown RBP20.17■□□□□ 0.82
SFXN1-208ENST00000507823 PIK3AP1Q6ZUJ8 805 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 CCDC186Q7Z3E2 898 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 C4orf32Q8N8J7 132 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 ZNF622Q969S3 477 aaKnown RBP eCLIP20.17■□□□□ 0.821e-6■□□□□ 10
SFXN1-208ENST00000507823 CAMKK2Q96RR4 588 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 OSBPL5Q9H0X9 879 aaPredicted RBP20.17■□□□□ 0.82
SFXN1-208ENST00000507823 USP40Q9NVE5 1235 aa20.17■□□□□ 0.82
SFXN1-208ENST00000507823 PARP1P09874 1014 aaKnown RBP20.16■□□□□ 0.82
SFXN1-208ENST00000507823 SNHG28P0DPA3 235 aa20.16■□□□□ 0.82
SFXN1-208ENST00000507823 EHD4Q9H223 541 aa20.16■□□□□ 0.82
SFXN1-208ENST00000507823 HSD3B7Q9H2F3 369 aa20.16■□□□□ 0.82
SFXN1-208ENST00000507823 ANO8Q9HCE9 1232 aaPredicted RBP20.16■□□□□ 0.82
SFXN1-208ENST00000507823 MTMR4Q9NYA4 1195 aa20.16■□□□□ 0.82
SFXN1-208ENST00000507823 PTGDRQ13258 359 aa20.16■□□□□ 0.82
SFXN1-208ENST00000507823 ZNF174Q15697 407 aa20.16■□□□□ 0.82
SFXN1-208ENST00000507823 GPKOWQ92917 476 aaPredicted RBP eCLIP20.16■□□□□ 0.82
SFXN1-208ENST00000507823 MXD3Q9BW11 206 aa20.16■□□□□ 0.82
SFXN1-208ENST00000507823 FOXN1O15353 648 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
SFXN1-208ENST00000507823 BMP6P22004 513 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 NOLC1Q14978 699 aaKnown RBP eCLIP20.15■□□□□ 0.82
SFXN1-208ENST00000507823 CNKSR1Q969H4 720 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 ZMYND12Q9H0C1 365 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 SIPA1L1O43166 1804 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 SLFN14P0C7P3 912 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 DACT2Q5SW24 774 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 RIOX1Q9H6W3 641 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 NRBP1Q9UHY1 535 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 SERPINB13Q9UIV8 391 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 MAN1B1Q9UKM7 699 aa20.15■□□□□ 0.82
SFXN1-208ENST00000507823 A0A087X0B3 334 aa20.14■□□□□ 0.82
SFXN1-208ENST00000507823 F8W031 263 aaPredicted RBP20.14■□□□□ 0.82
SFXN1-208ENST00000507823 CRKP46108 304 aa20.14■□□□□ 0.82
SFXN1-208ENST00000507823 TPM4P67936 248 aa20.14■□□□□ 0.82
SFXN1-208ENST00000507823 MORC3Q14149 939 aa20.14■□□□□ 0.82
SFXN1-208ENST00000507823 FBXW7Q969H0 707 aa20.14■□□□□ 0.82
SFXN1-208ENST00000507823 PYCARDQ9ULZ3 195 aa20.14■□□□□ 0.82
SFXN1-208ENST00000507823 PCDHA6Q9UN73 950 aa20.14■□□□□ 0.82
SFXN1-208ENST00000507823 PCDHA8Q9Y5H6 950 aa20.14■□□□□ 0.82
SFXN1-208ENST00000507823 CCDC144BQ3MJ40 725 aa20.14■□□□□ 0.81
SFXN1-208ENST00000507823 CC2D2BQ6DHV5 1058 aa20.14■□□□□ 0.81
SFXN1-208ENST00000507823 SYMPKQ92797 1274 aaKnown RBP20.14■□□□□ 0.81
SFXN1-208ENST00000507823 SHMT1P34896 483 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 MYL5Q02045 173 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 PICALMQ13492 652 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 CT47A1Q5JQC4 288 aaPredicted RBP20.13■□□□□ 0.81
SFXN1-208ENST00000507823 DRC7Q8IY82 874 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 EPSTI1Q96J88 318 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 PYM1Q9BRP8 204 aaKnown RBP20.13■□□□□ 0.81
SFXN1-208ENST00000507823 RGS17Q9UGC6 210 aaPredicted RBP20.13■□□□□ 0.81
SFXN1-208ENST00000507823 ESYT2A0FGR8 921 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 hCG_1984214I3L0E3 225 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 PRR29P0C7W0 189 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 PDHBP11177 359 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 ZNF713Q8N859 430 aaPredicted RBP20.13■□□□□ 0.81
SFXN1-208ENST00000507823 MLKLQ8NB16 471 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 CCDC12Q8WUD4 166 aaPredicted RBP20.13■□□□□ 0.81
SFXN1-208ENST00000507823 CCDC34Q96HJ3 373 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 PSME4Q14997 1843 aa20.13■□□□□ 0.81
SFXN1-208ENST00000507823 G3V3G9 751 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 NEMFO60524 1076 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 AKR1B1P15121 316 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 SCNN1DP51172 638 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 IL17AQ16552 155 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 ASPRV1Q53RT3 343 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 DCAF8Q5TAQ9 597 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 IDI2Q9BXS1 227 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 DBNDD1Q9H9R9 158 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 E2F4Q16254 413 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 USP17L2Q6R6M4 530 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 SMARCE1Q969G3 411 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 IMPACTQ9P2X3 320 aa20.12■□□□□ 0.81
SFXN1-208ENST00000507823 ECE2O60344 883 aa20.11■□□□□ 0.81
SFXN1-208ENST00000507823 GOLGA8HP0CJ92 632 aa20.11■□□□□ 0.81
SFXN1-208ENST00000507823 HEATR3Q7Z4Q2 680 aa20.11■□□□□ 0.81
SFXN1-208ENST00000507823 RRP36Q96EU6 259 aaKnown RBP20.11■□□□□ 0.81
SFXN1-208ENST00000507823 LONP1P36776 959 aaKnown RBP20.11■□□□□ 0.81
SFXN1-208ENST00000507823 RASGRP2Q7LDG7 609 aa20.11■□□□□ 0.81
SFXN1-208ENST00000507823 KCNQ5Q9NR82 932 aa20.11■□□□□ 0.81
SFXN1-208ENST00000507823 USP17L5A8MUK1 530 aa20.1■□□□□ 0.81
SFXN1-208ENST00000507823 PPP4R3BQ5MIZ7 849 aa20.1■□□□□ 0.81
SFXN1-208ENST00000507823 CACTINQ8WUQ7 758 aaKnown RBP20.1■□□□□ 0.81
SFXN1-208ENST00000507823 STK32BQ9NY57 414 aa20.1■□□□□ 0.81
SFXN1-208ENST00000507823 LAD1O00515 517 aa20.1■□□□□ 0.81
SFXN1-208ENST00000507823 TTLL1O95922 423 aa20.1■□□□□ 0.81
SFXN1-208ENST00000507823 HLA-DOAP06340 250 aa20.1■□□□□ 0.81
SFXN1-208ENST00000507823 EZH2Q15910 746 aaKnown RBP20.1■□□□□ 0.81
SFXN1-208ENST00000507823 PAGE5Q96GU1 130 aa20.1■□□□□ 0.81
SFXN1-208ENST00000507823 CCDC17Q96LX7 622 aa20.1■□□□□ 0.81
SFXN1-208ENST00000507823 DHX36Q9H2U1 1008 aaKnown RBP20.1■□□□□ 0.81
SFXN1-208ENST00000507823 DACH1Q9UI36 760 aa20.1■□□□□ 0.81
SFXN1-208ENST00000507823 SERPINA10Q9UK55 444 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms