RNA–Protein interactions for RNA: ENST00000507464.5

LDB2-209, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-209ENST00000507464 PCDHA4Q9UN74 947 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 SRPRBQ9Y5M8 271 aaKnown RBP13.55□□□□□ -0.24
LDB2-209ENST00000507464 ATRNL1Q5VV63 1379 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 DDTLA6NHG4 134 aaPredicted RBP13.55□□□□□ -0.24
LDB2-209ENST00000507464 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 ZBTB7AO95365 584 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 GOLGA8HP0CJ92 632 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 PDHBP11177 359 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 VEGFAP15692 232 aaPredicted RBP13.55□□□□□ -0.24
LDB2-209ENST00000507464 SYKP43405 635 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 CACNB3P54284 484 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 STX1AQ16623 288 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
LDB2-209ENST00000507464 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 TATDN1Q6P1N9 297 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 USP17L2Q6R6M4 530 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 SH3BP5LQ7L8J4 393 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 METTL16Q86W50 562 aaKnown RBP13.55□□□□□ -0.24
LDB2-209ENST00000507464 BLIDQ8IZY5 108 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 PIBF1Q8WXW3 757 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 CLIC6Q96NY7 704 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 GMLQ99445 158 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 TRIM34Q9BYJ4 488 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 TDRD3Q9H7E2 651 aaKnown RBP13.55□□□□□ -0.24
LDB2-209ENST00000507464 CLIP2Q9UDT6 1046 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 HDAC9Q9UKV0 1011 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 ZNRF3Q9ULT6 936 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 MTMR7Q9Y216 660 aa13.55□□□□□ -0.24
LDB2-209ENST00000507464 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
LDB2-209ENST00000507464 FAM205CA6NFA0 338 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 USP17L5A8MUK1 530 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 hCG_1984214I3L0E3 225 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 STXBP3O00186 592 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 PSMD14O00487 310 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 TCP10Q12799 353 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 HS1BP3Q53T59 392 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 TTC38Q5R3I4 469 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 NIM1KQ8IY84 436 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 ELOA2Q8IYF1 753 aaPredicted RBP13.54□□□□□ -0.24
LDB2-209ENST00000507464 ZNF713Q8N859 430 aaPredicted RBP13.54□□□□□ -0.24
LDB2-209ENST00000507464 CCDC12Q8WUD4 166 aaPredicted RBP13.54□□□□□ -0.24
LDB2-209ENST00000507464 GPKOWQ92917 476 aaPredicted RBP eCLIP13.54□□□□□ -0.24
LDB2-209ENST00000507464 RRP36Q96EU6 259 aaKnown RBP13.54□□□□□ -0.24
LDB2-209ENST00000507464 PRMT6Q96LA8 375 aaPredicted RBP13.54□□□□□ -0.24
LDB2-209ENST00000507464 RIOX1Q9H6W3 641 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 DNAJC18Q9H819 358 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 FAM13BQ9NYF5 915 aa13.54□□□□□ -0.24
LDB2-209ENST00000507464 MYH8P13535 1937 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 COL4A5P29400 1685 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 M0R2N6 131 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
LDB2-209ENST00000507464 RAD17O75943 681 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 ATP2B1P20020 1258 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
LDB2-209ENST00000507464 DALRD3Q5D0E6 543 aaKnown RBP13.53□□□□□ -0.24
LDB2-209ENST00000507464 HEATR3Q7Z4Q2 680 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
LDB2-209ENST00000507464 AGBL3Q8NEM8 1001 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 FERMT2Q96AC1 680 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 ANO10Q9NW15 660 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 TMOD2Q9NZR1 351 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 KIAA1468Q9P260 1216 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 SEC63Q9UGP8 760 aaKnown RBP13.53□□□□□ -0.24
LDB2-209ENST00000507464 KCNH3Q9ULD8 1083 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 SIPA1L1O43166 1804 aa13.53□□□□□ -0.24
LDB2-209ENST00000507464 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 ZNF165P49910 485 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 PIK3AP1Q6ZUJ8 805 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 LRRC47Q8N1G4 583 aaKnown RBP13.52□□□□□ -0.25
LDB2-209ENST00000507464 OGFOD1Q8N543 542 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 MKL1Q969V6 931 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 ZMYND12Q9H0C1 365 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 KANSL2Q9H9L4 492 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 NYAP2Q9P242 653 aa13.52□□□□□ -0.25
LDB2-209ENST00000507464 EIF6P56537 245 aaKnown RBP13.51□□□□□ -0.25
LDB2-209ENST00000507464 ATP2C1P98194 919 aaPredicted RBP13.51□□□□□ -0.25
LDB2-209ENST00000507464 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
LDB2-209ENST00000507464 DLGAP5Q15398 846 aa13.51□□□□□ -0.25
LDB2-209ENST00000507464 NOM1Q5C9Z4 860 aaKnown RBP13.51□□□□□ -0.25
LDB2-209ENST00000507464 GPATCH4Q5T3I0 446 aaKnown RBP13.51□□□□□ -0.25
LDB2-209ENST00000507464 RASGRP2Q7LDG7 609 aa13.51□□□□□ -0.25
LDB2-209ENST00000507464 FAM43AQ8N2R8 423 aa13.51□□□□□ -0.25
LDB2-209ENST00000507464 MTMR14Q8NCE2 650 aa13.51□□□□□ -0.25
LDB2-209ENST00000507464 USP25Q9UHP3 1055 aa13.51□□□□□ -0.25
LDB2-209ENST00000507464 PCDHA6Q9UN73 950 aa13.51□□□□□ -0.25
LDB2-209ENST00000507464 PCDHA8Q9Y5H6 950 aa13.51□□□□□ -0.25
LDB2-209ENST00000507464 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
LDB2-209ENST00000507464 ESYT2A0FGR8 921 aa13.5□□□□□ -0.25
LDB2-209ENST00000507464 GNA11P29992 359 aa13.5□□□□□ -0.25
LDB2-209ENST00000507464 MMP14P50281 582 aa13.5□□□□□ -0.25
LDB2-209ENST00000507464 NAPAP54920 295 aa13.5□□□□□ -0.25
LDB2-209ENST00000507464 ZNF174Q15697 407 aa13.5□□□□□ -0.25
LDB2-209ENST00000507464 FKBP1CQ5VVH2 108 aa13.5□□□□□ -0.25
LDB2-209ENST00000507464 KRBA2Q6ZNG9 492 aa13.5□□□□□ -0.25
LDB2-209ENST00000507464 TMEM179Q6ZVK1 233 aa13.5□□□□□ -0.25
LDB2-209ENST00000507464 CLEC10AQ8IUN9 316 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms