RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 ZBTB43O43298 467 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 AOC2O75106 756 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 DDAH1O94760 285 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 SLC1A4P43007 532 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 GTF2A2P52657 109 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 CCT2P78371 535 aaKnown RBP12.46□□□□□ -0.42
TRIM6-209ENST00000507320 STK3Q13188 491 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 ANKRD1Q15327 319 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 CCL15Q16663 113 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 GADL1Q6ZQY3 521 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 LPAR1Q92633 364 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 GMCL1Q96IK5 515 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 PTPN18Q99952 460 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 CPVLQ9H3G5 476 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 MAD2L2Q9UI95 211 aa12.46□□□□□ -0.42
TRIM6-209ENST00000507320 PARP14Q460N5 1801 aa12.45□□□□□ -0.42
TRIM6-209ENST00000507320 BMP3P12645 472 aa12.45□□□□□ -0.42
TRIM6-209ENST00000507320 CDC27P30260 824 aa12.45□□□□□ -0.42
TRIM6-209ENST00000507320 ZNF543Q08ER8 600 aa12.45□□□□□ -0.42
TRIM6-209ENST00000507320 TTBK2Q6IQ55 1244 aa12.45□□□□□ -0.42
TRIM6-209ENST00000507320 GPAT2Q6NUI2 795 aa12.45□□□□□ -0.42
TRIM6-209ENST00000507320 CMTR1Q8N1G2 835 aaKnown RBP12.45□□□□□ -0.42
TRIM6-209ENST00000507320 PROCA1Q8NCQ7 364 aaPredicted RBP12.45□□□□□ -0.42
TRIM6-209ENST00000507320 ZNF274Q96GC6 653 aaPredicted RBP12.45□□□□□ -0.42
TRIM6-209ENST00000507320 RPAP3Q9H6T3 665 aaPredicted RBP12.45□□□□□ -0.42
TRIM6-209ENST00000507320 NCOA5Q9HCD5 579 aaKnown RBP12.45□□□□□ -0.42
TRIM6-209ENST00000507320 FAM217BQ9NTX9 383 aaPredicted RBP12.45□□□□□ -0.42
TRIM6-209ENST00000507320 FBXO28Q9NVF7 368 aa12.45□□□□□ -0.42
TRIM6-209ENST00000507320 TMOD4Q9NZQ9 345 aa12.45□□□□□ -0.42
TRIM6-209ENST00000507320 RLFQ13129 1914 aa12.45□□□□□ -0.42
TRIM6-209ENST00000507320 PALM3A6NDB9 673 aaPredicted RBP12.44□□□□□ -0.42
TRIM6-209ENST00000507320 WDR46O15213 610 aaKnown RBP12.44□□□□□ -0.42
TRIM6-209ENST00000507320 DTNBO60941 627 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 CETPP11597 493 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 ADD1P35611 737 aaKnown RBP12.44□□□□□ -0.42
TRIM6-209ENST00000507320 VEGFBP49765 207 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 METAP2P50579 478 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM6-209ENST00000507320 KIF23Q02241 960 aaPredicted RBP12.44□□□□□ -0.42
TRIM6-209ENST00000507320 ST3GAL1Q11201 340 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 GRM4Q14833 912 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 SLC35G1Q2M3R5 365 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 SYNE3Q6ZMZ3 975 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 NBPF11Q86T75 865 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 FAM43AQ8N2R8 423 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 NECAB1Q8N987 351 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 FANCBQ8NB91 859 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 DCAF4Q8WV16 495 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
TRIM6-209ENST00000507320 LIMCH1Q9UPQ0 1083 aa12.44□□□□□ -0.42
TRIM6-209ENST00000507320 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
TRIM6-209ENST00000507320 TESPA1A2RU30 521 aaPredicted RBP12.43□□□□□ -0.42
TRIM6-209ENST00000507320 GOLGA8AA7E2F4 631 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 BTBD19C9JJ37 291 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 TMEM232C9JQI7 657 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 IGF2BP3O00425 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRIM6-209ENST00000507320 PLEKHA8P1O95397 391 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 PARP1P09874 1014 aaKnown RBP12.43□□□□□ -0.42
TRIM6-209ENST00000507320 SLC16A2P36021 539 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 SCRN1Q12765 414 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 NOGQ13253 232 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
TRIM6-209ENST00000507320 HOMEZQ8IX15 550 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 TANGO6Q9C0B7 1094 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 UBA5Q9GZZ9 404 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 AGTPBP1Q9UPW5 1226 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 NID2Q14112 1375 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 MANSC4A6NHS7 340 aaPredicted RBP12.43□□□□□ -0.42
TRIM6-209ENST00000507320 PFKFB2O60825 505 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 CALM1P0DP23 149 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 CALM2P0DP24 149 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 CALM3P0DP25 149 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 RCAN1P53805 252 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 RTN1Q16799 776 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 ASPRV1Q53RT3 343 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 CATSPERGQ6ZRH7 1159 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 CTCFLQ8NI51 663 aaPredicted RBP12.43□□□□□ -0.42
TRIM6-209ENST00000507320 TMX3Q96JJ7 454 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 MAP3K14Q99558 947 aa12.43□□□□□ -0.42
TRIM6-209ENST00000507320 SLKQ9H2G2 1235 aaPredicted RBP12.43□□□□□ -0.42
TRIM6-209ENST00000507320 KLRF2D3W0D1 207 aa12.42□□□□□ -0.42
TRIM6-209ENST00000507320 CYTH3O43739 400 aa12.42□□□□□ -0.42
TRIM6-209ENST00000507320 HOXA7P31268 230 aaPredicted RBP12.42□□□□□ -0.42
TRIM6-209ENST00000507320 GPATCH4Q5T3I0 446 aaKnown RBP12.42□□□□□ -0.42
TRIM6-209ENST00000507320 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
TRIM6-209ENST00000507320 CCDC82Q8N4S0 544 aa12.42□□□□□ -0.42
TRIM6-209ENST00000507320 SRBD1Q8N5C6 995 aaKnown RBP12.42□□□□□ -0.42
TRIM6-209ENST00000507320 IL27Q8NEV9 243 aa12.42□□□□□ -0.42
TRIM6-209ENST00000507320 SNX21Q969T3 373 aa12.42□□□□□ -0.42
TRIM6-209ENST00000507320 USP17L15C9J2P7 530 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 USP17L13C9JLJ4 530 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 USP17L11C9JVI0 530 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 USP17L18D6R9N7 530 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 USP17L22D6RA61 530 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 USP17L17D6RBQ6 530 aa12.41□□□□□ -0.42
TRIM6-209ENST00000507320 USP17L19D6RCP7 530 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms