RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 VPS16Q9H269 839 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 GUCA1BQ9UMX6 200 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 GSG1L2A8MUP6 293 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 AGPSO00116 658 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 PDE8BO95263 885 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 CSB-PGBD3P0DP91 1061 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 RRAGBQ5VZM2 374 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 PDXDC2PQ6P474 469 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 AMOTL1Q8IY63 956 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 NACAP1Q9BZK3 213 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 TAB2Q9NYJ8 693 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 TAOK2Q9UL54 1235 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 FAM184BQ9ULE4 1060 aa19.96■□□□□ 0.79
NUP54-205ENST00000507257 ATXN2Q99700 1313 aaKnown RBP19.96■□□□□ 0.79
NUP54-205ENST00000507257 LGALS16A8MUM7 142 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 PRPF3O43395 683 aaKnown RBP19.95■□□□□ 0.78
NUP54-205ENST00000507257 KRT86O43790 486 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 ATP1A1P05023 1023 aaKnown RBP19.95■□□□□ 0.78
NUP54-205ENST00000507257 EEF1GP26641 437 aaKnown RBP19.95■□□□□ 0.78
NUP54-205ENST00000507257 CDC25AP30304 524 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 HERVK_113P62684 666 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 MAP3K12Q12852 859 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 PPFIA1Q13136 1202 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 FNBP4Q8N3X1 1017 aaPredicted RBP19.95■□□□□ 0.78
NUP54-205ENST00000507257 AENQ8WTP8 325 aaKnown RBP19.95■□□□□ 0.78
NUP54-205ENST00000507257 PURBQ96QR8 312 aaKnown RBP19.95■□□□□ 0.78
NUP54-205ENST00000507257 CEP89Q96ST8 783 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 SELENOOQ9BVL4 669 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 DEF6Q9H4E7 631 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 INCENPQ9NQS7 918 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 LUC7L2Q9Y383 392 aaKnown RBP19.95■□□□□ 0.78
NUP54-205ENST00000507257 PCDH11XQ9BZA7 1347 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 PCDH11YQ9BZA8 1340 aa19.95■□□□□ 0.78
NUP54-205ENST00000507257 GGCXP38435 758 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 TRAPPC10P48553 1259 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 UBXN1Q04323 297 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 NKX1-1Q15270 411 aaPredicted RBP19.94■□□□□ 0.78
NUP54-205ENST00000507257 PKN1Q16512 942 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 CCDC170Q8IYT3 715 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 MB21D1Q8N884 522 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 NELFBQ8WX92 580 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 TNFRSF25Q93038 417 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 SHISA4Q96DD7 197 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 PLCH1Q4KWH8 1693 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 TTC26A0AVF1 554 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 ANKRD18BA2A2Z9 1011 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 MBD4O95243 580 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 CASP1P29466 404 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 FUT2Q10981 343 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 TSR1Q2NL82 804 aaKnown RBP19.94■□□□□ 0.78
NUP54-205ENST00000507257 CCDC122Q5T0U0 273 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 CCDC70Q6NSX1 233 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 MMGT1Q8N4V1 131 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 RETREG2Q8NC44 543 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 ZNF507Q8TCN5 953 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 JAKMIP2Q96AA8 810 aa19.94■□□□□ 0.78
NUP54-205ENST00000507257 ZFP91Q96JP5 570 aaPredicted RBP19.94■□□□□ 0.78
NUP54-205ENST00000507257 PDS5AQ29RF7 1337 aaKnown RBP19.94■□□□□ 0.78
NUP54-205ENST00000507257 ITGA6P23229 1130 aa19.93■□□□□ 0.78
NUP54-205ENST00000507257 CYLC1P35663 651 aaPredicted RBP19.93■□□□□ 0.78
NUP54-205ENST00000507257 PHKA1P46020 1223 aa19.93■□□□□ 0.78
NUP54-205ENST00000507257 IRAK1P51617 712 aa19.93■□□□□ 0.78
NUP54-205ENST00000507257 SEC23AQ15436 765 aa19.93■□□□□ 0.78
NUP54-205ENST00000507257 FAM89AQ96GI7 184 aa19.93■□□□□ 0.78
NUP54-205ENST00000507257 SH3GL2Q99962 352 aa19.93■□□□□ 0.78
NUP54-205ENST00000507257 GOLGA6CA6NDK9 693 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 GOLGA8KD6RF30 607 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 CLSTN1O94985 981 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 GOLGA6DP0CG33 693 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 EPB41P11171 864 aaKnown RBP19.92■□□□□ 0.78
NUP54-205ENST00000507257 FGFR2P21802 821 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 CDK17Q00537 523 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 WDR59Q6PJI9 974 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 LPIN2Q92539 896 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 NCAPGQ9BPX3 1015 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 NUP58Q9BVL2 599 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 THAP9Q9H5L6 903 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 CNNM1Q9NRU3 951 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 GOLGA6AQ9NYA3 693 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 HDAC6Q9UBN7 1215 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 TRIM10Q9UDY6 481 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 ANKRD36CQ5JPF3 1778 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 DLEC1Q9Y238 1755 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 GOLGA6BA6NDN3 693 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 EXOC5O00471 708 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 EBAG9O00559 213 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 PRLRP16471 622 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 CTSWP56202 376 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 TTC38Q5R3I4 469 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 IRF2BP1Q8IU81 584 aa19.92■□□□□ 0.78
NUP54-205ENST00000507257 NOC3LQ8WTT2 800 aaKnown RBP19.92■□□□□ 0.78
NUP54-205ENST00000507257 RBM28Q9NW13 759 aaKnown RBP19.92■□□□□ 0.78
NUP54-205ENST00000507257 SOS2Q07890 1332 aaPredicted RBP19.91■□□□□ 0.78
NUP54-205ENST00000507257 FAM205CA6NFA0 338 aa19.91■□□□□ 0.78
NUP54-205ENST00000507257 PARP1P09874 1014 aaKnown RBP19.91■□□□□ 0.78
NUP54-205ENST00000507257 PUM3Q15397 648 aaKnown RBP19.91■□□□□ 0.78
NUP54-205ENST00000507257 EARS2Q5JPH6 523 aaKnown RBP19.91■□□□□ 0.78
NUP54-205ENST00000507257 MCTP2Q6DN12 878 aa19.91■□□□□ 0.78
NUP54-205ENST00000507257 POTEDQ86YR6 584 aa19.91■□□□□ 0.78
NUP54-205ENST00000507257 TSGA10Q9BZW7 698 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms