RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 MAP3K14Q99558 947 aa16.55■□□□□ 0.24
RNF4-208ENST00000507247 NUP88Q99567 741 aaPredicted RBP16.55■□□□□ 0.24
RNF4-208ENST00000507247 A0A0G2JLL6 359 aaPredicted RBP16.54■□□□□ 0.24
RNF4-208ENST00000507247 PALM3A6NDB9 673 aaPredicted RBP16.54■□□□□ 0.24
RNF4-208ENST00000507247 C19orf81C9J6K1 198 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 DTNBO60941 627 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
RNF4-208ENST00000507247 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 ADD1P35611 737 aaKnown RBP16.54■□□□□ 0.24
RNF4-208ENST00000507247 USP14P54578 494 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 ZNF543Q08ER8 600 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 CCDC96Q2M329 555 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 KCTD1Q719H9 257 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 PRRT2Q7Z6L0 340 aaPredicted RBP16.54■□□□□ 0.24
RNF4-208ENST00000507247 CTCFLQ8NI51 663 aaPredicted RBP16.54■□□□□ 0.24
RNF4-208ENST00000507247 GMCL1Q96IK5 515 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 C12orf42Q96LP6 360 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 ABT1Q9ULW3 272 aaKnown RBP16.54■□□□□ 0.24
RNF4-208ENST00000507247 RLFQ13129 1914 aa16.54■□□□□ 0.24
RNF4-208ENST00000507247 PCNTO95613 3336 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 CXCL11O14625 94 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 VCAM1P19320 739 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 SLC1A4P43007 532 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 MKRN3Q13064 507 aaKnown RBP16.53■□□□□ 0.24
RNF4-208ENST00000507247 CUL4AQ13619 759 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 SLC35G1Q2M3R5 365 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 ASPRV1Q53RT3 343 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 FAM83BQ5T0W9 1011 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 IFFO2Q5TF58 517 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 SPRYD7Q5W111 196 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 TTBK2Q6IQ55 1244 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 RGMBQ6NW40 437 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 CMTR1Q8N1G2 835 aaKnown RBP16.53■□□□□ 0.24
RNF4-208ENST00000507247 LPAR1Q92633 364 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 CPVLQ9H3G5 476 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 GPCPD1Q9NPB8 672 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
RNF4-208ENST00000507247 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
RNF4-208ENST00000507247 WDR46O15213 610 aaKnown RBP16.52■□□□□ 0.24
RNF4-208ENST00000507247 CTDNEP1O95476 244 aa16.52■□□□□ 0.24
RNF4-208ENST00000507247 BMP3P12645 472 aa16.52■□□□□ 0.24
RNF4-208ENST00000507247 KIF5BP33176 963 aa16.52■□□□□ 0.24
RNF4-208ENST00000507247 SLC4A3P48751 1232 aa16.52■□□□□ 0.24
RNF4-208ENST00000507247 ZNF157P51786 506 aaPredicted RBP16.52■□□□□ 0.24
RNF4-208ENST00000507247 MOGSQ13724 837 aa16.52■□□□□ 0.24
RNF4-208ENST00000507247 BECN1Q14457 450 aa16.52■□□□□ 0.24
RNF4-208ENST00000507247 NTRK3Q16288 839 aa16.52■□□□□ 0.24
RNF4-208ENST00000507247 TMTC3Q6ZXV5 915 aa16.52■□□□□ 0.24
RNF4-208ENST00000507247 NBPF11Q86T75 865 aa16.52■□□□□ 0.24
RNF4-208ENST00000507247 RBM28Q9NW13 759 aaKnown RBP16.52■□□□□ 0.24
RNF4-208ENST00000507247 KLRF2D3W0D1 207 aa16.51■□□□□ 0.23
RNF4-208ENST00000507247 PPFIA3O75145 1194 aa16.51■□□□□ 0.23
RNF4-208ENST00000507247 SLC10A3P09131 477 aa16.51■□□□□ 0.23
RNF4-208ENST00000507247 ZBTB48P10074 688 aaPredicted RBP16.51■□□□□ 0.23
RNF4-208ENST00000507247 FUT2Q10981 343 aa16.51■□□□□ 0.23
RNF4-208ENST00000507247 PPP2R5BQ15173 497 aa16.51■□□□□ 0.23
RNF4-208ENST00000507247 GPATCH4Q5T3I0 446 aaKnown RBP16.51■□□□□ 0.23
RNF4-208ENST00000507247 SRBD1Q8N5C6 995 aaKnown RBP16.51■□□□□ 0.23
RNF4-208ENST00000507247 NSUN7Q8NE18 718 aaKnown RBP16.51■□□□□ 0.23
RNF4-208ENST00000507247 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
RNF4-208ENST00000507247 MS4A4AQ96JQ5 239 aa16.51■□□□□ 0.23
RNF4-208ENST00000507247 UBA5Q9GZZ9 404 aa16.51■□□□□ 0.23
RNF4-208ENST00000507247 RPAP3Q9H6T3 665 aaPredicted RBP16.51■□□□□ 0.23
RNF4-208ENST00000507247 TMOD4Q9NZQ9 345 aa16.51■□□□□ 0.23
RNF4-208ENST00000507247 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
RNF4-208ENST00000507247 CNTNAP5Q8WYK1 1306 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 CCDC196A0A1B0GTZ2 297 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 FAM155AB1AL88 458 aaPredicted RBP16.5■□□□□ 0.23
RNF4-208ENST00000507247 TMEM232C9JQI7 657 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 CYTH3O43739 400 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 SLC16A2P36021 539 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 SNAPC2Q13487 334 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 TREML2Q5T2D2 321 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 GADL1Q6ZQY3 521 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
RNF4-208ENST00000507247 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
RNF4-208ENST00000507247 COL11A1P12107 1806 aaPredicted RBP16.49■□□□□ 0.23
RNF4-208ENST00000507247 CPLX1O14810 134 aa16.49■□□□□ 0.23
RNF4-208ENST00000507247 JAK2O60674 1132 aa16.49■□□□□ 0.23
RNF4-208ENST00000507247 IFNAR1P17181 557 aa16.49■□□□□ 0.23
RNF4-208ENST00000507247 GNAQP50148 359 aa16.49■□□□□ 0.23
RNF4-208ENST00000507247 COL13A1Q5TAT6 717 aaPredicted RBP16.49■□□□□ 0.23
RNF4-208ENST00000507247 BTNL9Q6UXG8 535 aa16.49■□□□□ 0.23
RNF4-208ENST00000507247 PHKBQ93100 1093 aa16.49■□□□□ 0.23
RNF4-208ENST00000507247 FBXO28Q9NVF7 368 aa16.49■□□□□ 0.23
RNF4-208ENST00000507247 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
RNF4-208ENST00000507247 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
RNF4-208ENST00000507247 HSPA1AP0DMV8 641 aaKnown RBP16.48■□□□□ 0.23
RNF4-208ENST00000507247 HSPA1BP0DMV9 641 aaKnown RBP16.48■□□□□ 0.23
RNF4-208ENST00000507247 STAT2P52630 851 aa16.48■□□□□ 0.23
RNF4-208ENST00000507247 GTF2A2P52657 109 aa16.48■□□□□ 0.23
RNF4-208ENST00000507247 CYP4F22Q6NT55 531 aa16.48■□□□□ 0.23
RNF4-208ENST00000507247 GPAT2Q6NUI2 795 aa16.48■□□□□ 0.23
RNF4-208ENST00000507247 SPRYD3Q8NCJ5 442 aa16.48■□□□□ 0.23
RNF4-208ENST00000507247 SMARCC2Q8TAQ2 1214 aa16.48■□□□□ 0.23
RNF4-208ENST00000507247 BRI3BPQ8WY22 251 aa16.48■□□□□ 0.23
RNF4-208ENST00000507247 LZTS2Q9BRK4 669 aa16.48■□□□□ 0.23
RNF4-208ENST00000507247 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms