RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ACTL7BQ9Y614 415 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 SART1O43290 800 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 CBFA2T2O43439 604 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 MARCH6O60337 910 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 ITGAVP06756 1048 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 MYCLP1P12525 358 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 CNGA1P29973 690 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 USP11P51784 963 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 PPP2R2AP63151 447 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 PABPC4Q13310 644 aaKnown RBP eCLIP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 FNDC3BQ53EP0 1204 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 PRRT3Q5FWE3 981 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 FAM209AQ5JX71 171 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 NBPF12Q5TAG4 269 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 DCAF15Q66K64 600 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 ARMCX6Q7L4S7 300 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 UBE3DQ7Z6J8 389 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 CRACR2BQ8N4Y2 399 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 C2CD4AQ8NCU7 369 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 BVESQ8NE79 360 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 PPP1R13LQ8WUF5 828 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 CHAC2Q8WUX2 184 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 ZNF512BQ96KM6 892 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 EXOC2Q96KP1 924 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 FGD4Q96M96 766 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 NCOA5Q9HCD5 579 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 ARHGEF4Q9NR80 690 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 FAM105AQ9NUU6 356 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 WHRNQ9P202 907 aa4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 MRPS23Q9Y3D9 190 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-205ENST00000506426 DNAJC25-GNG10A0A024R161 153 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 F8W735 103 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 APBA3O96018 575 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 FGFR1P11362 822 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 CD247P20963 164 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 ETV3P41162 512 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 SUMO1P63165 101 aaKnown RBP4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 AUHQ13825 339 aaKnown RBP4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 CBX2Q14781 532 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 POMZP3Q6PJE2 187 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 ZNF227Q86WZ6 799 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 C7orf61Q8IZ16 206 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 RPUSD2Q8IZ73 545 aaKnown RBP4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 KREMEN1Q96MU8 473 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 YIPF2Q9BWQ6 316 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 MRPL4Q9BYD3 311 aaKnown RBP4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 CEP41Q9BYV8 373 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 ACSS3Q9H6R3 686 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 CAAP1Q9H8G2 361 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 GOLGA2P5Q9HBQ8 144 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 DDX56Q9NY93 547 aaKnown RBP4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 FBXL21Q9UKT6 434 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 AKT3Q9Y243 479 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 ZNF451Q9Y4E5 1061 aa4.47□□□□□ -1.69
TRAPPC11-205ENST00000506426 A0A087WZG4 1122 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 IRS4O14654 1257 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 PRODHO43272 600 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 GAS2O43903 313 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 RAPGEF3O95398 923 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 PABPC1P11940 636 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 ITGA4P13612 1032 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 RAB6AP20340 208 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 SOX5P35711 763 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 CT47A1Q5JQC4 288 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 NOL9Q5SY16 702 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 YOD1Q5VVQ6 348 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 LETMD1Q6P1Q0 360 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 SHISA2Q6UWI4 295 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 NSMFQ6X4W1 530 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 CDH24Q86UP0 819 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 THNSL2Q86YJ6 484 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 AGGF1Q8N302 714 aaeCLIP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 ZNF513Q8N8E2 541 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 DNAJB8Q8NHS0 232 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 VWCEQ96DN2 955 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 RCC1LQ96I51 464 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 MIPEPQ99797 713 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 ASPNQ9BXN1 380 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 AKTIPQ9H8T0 292 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 GP6Q9HCN6 339 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 TYW1Q9NV66 732 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 APEX2Q9UBZ4 518 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 DIS3Q9Y2L1 958 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 PCDHB12Q9Y5F1 795 aa4.46□□□□□ -1.7
TRAPPC11-205ENST00000506426 CYP7A1P22680 504 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 STAT3P40763 770 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 LRP8Q14114 963 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 ARHGEF39Q8N4T4 335 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 RNF141Q8WVD5 230 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 LENG1Q96BZ8 264 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 MRGPRX3Q96LB0 322 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 FBXL18Q96ME1 805 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 CLUHP3Q96NS8 147 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 IRF2BPLQ9H1B7 796 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 HOMER2Q9NSB8 354 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 INTS7Q9NVH2 962 aaKnown RBP4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 MAGEC2Q9UBF1 373 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 USP21Q9UK80 565 aa4.45□□□□□ -1.7
TRAPPC11-205ENST00000506426 ATP8A1Q9Y2Q0 1164 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms