RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 GOLGA8BA8MQT2 603 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 USP17L15C9J2P7 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 USP17L13C9JLJ4 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 USP17L11C9JVI0 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 USP17L18D6R9N7 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 USP17L22D6RA61 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 USP17L17D6RBQ6 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 USP17L19D6RCP7 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 USP17L20D6RJB6 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 PARP1P09874 1014 aaKnown RBP13.06□□□□□ -0.32
TRIM23-205ENST00000506400 PDIA3P30101 505 aaKnown RBP13.06□□□□□ -0.32
TRIM23-205ENST00000506400 GNAQP50148 359 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM23-205ENST00000506400 USP17L24Q0WX57 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 GRM1Q13255 1194 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 MOGSQ13724 837 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 GRM4Q14833 912 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 CCDC96Q2M329 555 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 KIAA1755Q5JYT7 1200 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 ANKRD23Q86SG2 305 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 MICU3Q86XE3 530 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 SPICE1Q8N0Z3 855 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 FANCBQ8NB91 859 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 CHMP4CQ96CF2 233 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 LZTS2Q9BRK4 669 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
TRIM23-205ENST00000506400 MYL10Q9BUA6 226 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 RBM28Q9NW13 759 aaKnown RBP13.06□□□□□ -0.32
TRIM23-205ENST00000506400 TPCN1Q9ULQ1 816 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 AGTPBP1Q9UPW5 1226 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
TRIM23-205ENST00000506400 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
TRIM23-205ENST00000506400 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
TRIM23-205ENST00000506400 GOLGA8AA7E2F4 631 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 PLA2G6O60733 806 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 OSBPP22059 807 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 HOXA7P31268 230 aaPredicted RBP13.05□□□□□ -0.32
TRIM23-205ENST00000506400 KIF23Q02241 960 aaPredicted RBP13.05□□□□□ -0.32
TRIM23-205ENST00000506400 ZNF543Q08ER8 600 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 DGKZQ13574 1117 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 OTUD7BQ6GQQ9 843 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 GPAT2Q6NUI2 795 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 CATSPERGQ6ZRH7 1159 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
TRIM23-205ENST00000506400 FAM160B2Q86V87 743 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 CHURC1Q8WUH1 139 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 BRI3BPQ8WY22 251 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 SNX21Q969T3 373 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 SLKQ9H2G2 1235 aaPredicted RBP13.05□□□□□ -0.32
TRIM23-205ENST00000506400 RPAP3Q9H6T3 665 aaPredicted RBP13.05□□□□□ -0.32
TRIM23-205ENST00000506400 ZCCHC17Q9NP64 241 aaKnown RBP13.05□□□□□ -0.32
TRIM23-205ENST00000506400 SH2B1Q9NRF2 756 aaPredicted RBP13.05□□□□□ -0.32
TRIM23-205ENST00000506400 FEM1BQ9UK73 627 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
TRIM23-205ENST00000506400 SLC45A1Q9Y2W3 748 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 NID2Q14112 1375 aa13.05□□□□□ -0.32
TRIM23-205ENST00000506400 TMEM232C9JQI7 657 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 DHX16O60231 1041 aaKnown RBP13.04□□□□□ -0.32
TRIM23-205ENST00000506400 PFKFB2O60825 505 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 RXRAP19793 462 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 MAP2K2P36507 400 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 TM4SF4P48230 202 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 STAT2P52630 851 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 HTRA3P83110 453 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 RTN1Q16799 776 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 KCTD1Q719H9 257 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
TRIM23-205ENST00000506400 TANGO6Q9C0B7 1094 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 GPCPD1Q9NPB8 672 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 MAD2L2Q9UI95 211 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 PNMA3Q9UL41 463 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 FRMPD2Q68DX3 1309 aaPredicted RBP13.04□□□□□ -0.32
TRIM23-205ENST00000506400 MYPNQ86TC9 1320 aa13.04□□□□□ -0.32
TRIM23-205ENST00000506400 BTBD19C9JJ37 291 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 KLRF2D3W0D1 207 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 FDX1P10109 184 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 SMARCA1P28370 1054 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 VEGFBP49765 207 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
TRIM23-205ENST00000506400 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
TRIM23-205ENST00000506400 STK3Q13188 491 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 COG2Q14746 738 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 ME3Q16798 604 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 TREML2Q5T2D2 321 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 CPLX2Q6PUV4 134 aaKnown RBP13.03□□□□□ -0.32
TRIM23-205ENST00000506400 BTNL9Q6UXG8 535 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 RAB11FIP4Q86YS3 637 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 CCDC144CPQ8IYA2 1237 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 PRPF38AQ8NAV1 312 aaKnown RBP13.03□□□□□ -0.32
TRIM23-205ENST00000506400 HOXC10Q9NYD6 342 aa13.03□□□□□ -0.32
TRIM23-205ENST00000506400 PDHXO00330 501 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 CPLX1O14810 134 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 AOC2O75106 756 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 FLOT1O75955 427 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
TRIM23-205ENST00000506400 ALDH1A1P00352 501 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 GOLGA8HP0CJ92 632 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 DSG3P32926 999 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms