RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 SHCBP1Q8NEM2 672 aa12.55□□□□□ -0.4
BRIX1-202ENST00000506023 PANK1Q8TE04 598 aa12.55□□□□□ -0.4
BRIX1-202ENST00000506023 MYLIPQ8WY64 445 aa12.55□□□□□ -0.4
BRIX1-202ENST00000506023 TANGO6Q9C0B7 1094 aa12.55□□□□□ -0.4
BRIX1-202ENST00000506023 SEMA6BQ9H3T3 888 aa12.55□□□□□ -0.4
BRIX1-202ENST00000506023 CABP5Q9NP86 173 aa12.55□□□□□ -0.4
BRIX1-202ENST00000506023 PRDM5Q9NQX1 630 aaPredicted RBP12.55□□□□□ -0.4
BRIX1-202ENST00000506023 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
BRIX1-202ENST00000506023 GOLIM4O00461 696 aa12.54□□□□□ -0.4
BRIX1-202ENST00000506023 PGK2P07205 417 aa12.54□□□□□ -0.4
BRIX1-202ENST00000506023 REPS2Q8NFH8 660 aa12.54□□□□□ -0.4
BRIX1-202ENST00000506023 RHPN1Q8TCX5 695 aa12.54□□□□□ -0.4
BRIX1-202ENST00000506023 LBHD1Q9BQE6 289 aaPredicted RBP12.54□□□□□ -0.4
BRIX1-202ENST00000506023 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
BRIX1-202ENST00000506023 ADAMTS5Q9UNA0 930 aa12.54□□□□□ -0.4
BRIX1-202ENST00000506023 TMX2Q9Y320 296 aa12.54□□□□□ -0.4
BRIX1-202ENST00000506023 TLE2Q04725 743 aa12.53□□□□□ -0.4
BRIX1-202ENST00000506023 ZNF697Q5TEC3 545 aa12.53□□□□□ -0.4
BRIX1-202ENST00000506023 NCAPG2Q86XI2 1143 aa12.53□□□□□ -0.4
BRIX1-202ENST00000506023 USP38Q8NB14 1042 aa12.53□□□□□ -0.4
BRIX1-202ENST00000506023 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
BRIX1-202ENST00000506023 VCPKMTQ9H867 229 aa12.53□□□□□ -0.4
BRIX1-202ENST00000506023 APBB1O00213 710 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 ADCY6O43306 1168 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 STRNO43815 780 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 FLOT1O75955 427 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 MBD4O95243 580 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 PGK1P00558 417 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 ZNF865P0CJ78 1059 aaPredicted RBP12.52□□□□□ -0.41
BRIX1-202ENST00000506023 ICA1Q05084 483 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 PLS1Q14651 629 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 ZNF792Q3KQV3 632 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 C1orf53Q5VUE5 145 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 TMEM179Q6ZVK1 233 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 CRNKL1Q9BZJ0 848 aaKnown RBP12.52□□□□□ -0.41
BRIX1-202ENST00000506023 HOXC10Q9NYD6 342 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 ZNF214Q9UL59 606 aaPredicted RBP12.52□□□□□ -0.41
BRIX1-202ENST00000506023 PHF24Q9UPV7 400 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 ROBO3Q96MS0 1386 aa12.52□□□□□ -0.41
BRIX1-202ENST00000506023 MYADML2A6NDP7 307 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 KBTBD13C9JR72 458 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 ADAMTS4O75173 837 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 EEF2P13639 858 aaKnown RBP12.51□□□□□ -0.41
BRIX1-202ENST00000506023 ADD2P35612 726 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 CDK8P49336 464 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 C12orf60Q5U649 245 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 FTSJ3Q8IY81 847 aaKnown RBP12.51□□□□□ -0.41
BRIX1-202ENST00000506023 ARRDC4Q8NCT1 418 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 MAFAQ8NHW3 353 aaPredicted RBP12.51□□□□□ -0.41
BRIX1-202ENST00000506023 MROH8Q9H579 483 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 RIPK3Q9Y572 518 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
BRIX1-202ENST00000506023 A0A1W2PQ45 241 aaPredicted RBP12.5□□□□□ -0.41
BRIX1-202ENST00000506023 A0A1W2PQY0 241 aa12.5□□□□□ -0.41
BRIX1-202ENST00000506023 SMAD3P84022 425 aaKnown RBP12.5□□□□□ -0.41
BRIX1-202ENST00000506023 ABRAQ8N0Z2 381 aa12.5□□□□□ -0.41
BRIX1-202ENST00000506023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.5□□□□□ -0.41
BRIX1-202ENST00000506023 FGD4Q96M96 766 aa12.5□□□□□ -0.41
BRIX1-202ENST00000506023 NUP88Q99567 741 aaPredicted RBP12.5□□□□□ -0.41
BRIX1-202ENST00000506023 PRKAG2Q9UGJ0 569 aa12.5□□□□□ -0.41
BRIX1-202ENST00000506023 USP17L12C9JPN9 530 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 USP17L21D6R901 530 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 VWA5AO00534 786 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 KIAA0355O15063 1070 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 WDR46O15213 610 aaKnown RBP12.49□□□□□ -0.41
BRIX1-202ENST00000506023 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
BRIX1-202ENST00000506023 CLTBP09497 229 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 FAAP100Q0VG06 881 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 GRIN2CQ14957 1233 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 FAM83BQ5T0W9 1011 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 CCSAPQ6IQ19 270 aaPredicted RBP12.49□□□□□ -0.41
BRIX1-202ENST00000506023 C16orf86Q6ZW13 317 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 RIOX2Q8IUF8 465 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 MB21D1Q8N884 522 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 TINF2Q9BSI4 451 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 PUS7LQ9H0K6 701 aaKnown RBP12.49□□□□□ -0.41
BRIX1-202ENST00000506023 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 XPNPEP3Q9NQH7 507 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
BRIX1-202ENST00000506023 SYNRGQ9UMZ2 1314 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 PQBP1O60828 265 aaKnown RBP12.48□□□□□ -0.41
BRIX1-202ENST00000506023 FCER1AP12319 257 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 PTGS1P23219 599 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 TTF1Q15361 905 aaPredicted RBP12.48□□□□□ -0.41
BRIX1-202ENST00000506023 CTR9Q6PD62 1173 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 TMED8Q6PL24 325 aaPredicted RBP12.48□□□□□ -0.41
BRIX1-202ENST00000506023 C16orf59Q7L2K0 433 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 ERC1Q8IUD2 1116 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 MMP19Q99542 508 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 SWAP70Q9UH65 585 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 PPP1R9AQ9ULJ8 1098 aa12.48□□□□□ -0.41
BRIX1-202ENST00000506023 SCN5AQ14524 2016 aa12.47□□□□□ -0.41
BRIX1-202ENST00000506023 TRANK1O15050 2925 aa12.47□□□□□ -0.41
BRIX1-202ENST00000506023 XIRP2A4UGR9 3374 aa12.47□□□□□ -0.41
BRIX1-202ENST00000506023 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
BRIX1-202ENST00000506023 KLHDC9Q8NEP7 349 aa12.47□□□□□ -0.41
BRIX1-202ENST00000506023 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms