RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CABP5Q9NP86 173 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 FEM1BQ9UK73 627 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 SREBF2Q12772 1141 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 FAM43AQ8N2R8 423 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 CYTH3O43739 400 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 CALM1P0DP23 149 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 CALM2P0DP24 149 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 CALM3P0DP25 149 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 PDIA3P30101 505 aaKnown RBP9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 IQCA1Q86XH1 822 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 SHISA4Q96DD7 197 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 JAKMIP1Q96N16 626 aaKnown RBP9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 SLC38A10Q9HBR0 1119 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 GPHNQ9NQX3 736 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 PPP1R9AQ9ULJ8 1098 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 TSPY2A6NKD2 308 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 SPDYE16A6NNV3 312 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 CD2BP2O95400 341 aaKnown RBP9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 CTDNEP1O95476 244 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 GPATCH4Q5T3I0 446 aaKnown RBP9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 CASTP20810 708 aaKnown RBP9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 BLOC1S2Q6QNY1 142 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 TMTC3Q6ZXV5 915 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZNF654Q8IZM8 581 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 SAMD3Q8N6K7 520 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 SHCBP1Q8NEM2 672 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 LZTS2Q9BRK4 669 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZNF214Q9UL59 606 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L15C9J2P7 530 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L13C9JLJ4 530 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L11C9JVI0 530 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L18D6R9N7 530 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L22D6RA61 530 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L17D6RBQ6 530 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L19D6RCP7 530 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L20D6RJB6 530 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 M0R2N6 131 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 DDIT3P35638 169 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZNF157P51786 506 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L24Q0WX57 530 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 Q6ZUG5 572 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 FAM160B2Q86V87 743 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 TPCN1Q9ULQ1 816 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 ARID2Q68CP9 1835 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 AK2P54819 239 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 KIF23Q02241 960 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 SPP2Q13103 211 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 DGKZQ13574 1117 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 CYP4F22Q6NT55 531 aa9.72□□□□□ -0.85
CDC42SE2-208ENST00000505065 ALDH1A1P00352 501 aa9.71□□□□□ -0.85
CDC42SE2-208ENST00000505065 ANKRD1Q15327 319 aa9.71□□□□□ -0.85
CDC42SE2-208ENST00000505065 MB21D1Q8N884 522 aa9.71□□□□□ -0.85
CDC42SE2-208ENST00000505065 OTUD5Q96G74 571 aa9.71□□□□□ -0.85
CDC42SE2-208ENST00000505065 RBM28Q9NW13 759 aaKnown RBP9.71□□□□□ -0.85
CDC42SE2-208ENST00000505065 LOXHD1Q8IVV2 1947 aa9.71□□□□□ -0.85
CDC42SE2-208ENST00000505065 CA12O43570 354 aa9.71□□□□□ -0.85
CDC42SE2-208ENST00000505065 WTAPQ15007 396 aa9.71□□□□□ -0.85
CDC42SE2-208ENST00000505065 MORC4Q8TE76 937 aa9.71□□□□□ -0.85
CDC42SE2-208ENST00000505065 OPLAHO14841 1288 aa9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 RANBP6O60518 1105 aaKnown RBP9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 PPP1R11O60927 126 aaPredicted RBP9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 PKN1Q16512 942 aa9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 SLC4A8Q2Y0W8 1093 aa9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 RASGRP2Q7LDG7 609 aa9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 CCDC84Q86UT8 332 aaPredicted RBP9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 GTF3C6Q969F1 213 aa9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 ASCC2Q9H1I8 757 aaPredicted RBP9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 RBPJLQ9UBG7 517 aa9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 CLIP2Q9UDT6 1046 aa9.71□□□□□ -0.86
CDC42SE2-208ENST00000505065 CDC27P30260 824 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 CAP1Q01518 475 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 IFIT1BQ5T764 474 aaKnown RBP9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 VWA5AO00534 786 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 AOC2O75106 756 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 CPA1P15085 419 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 TRDNQ13061 729 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 TMEM67Q5HYA8 995 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 DOCK3Q8IZD9 2030 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 DNAJC25-GNG10A0A024R161 153 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 LARGE1O95461 756 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 IFNAR1P17181 557 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 CLK2P49760 499 aaKnown RBP9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 HMGCS2P54868 508 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 SLFN13Q68D06 897 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 SRBD1Q8N5C6 995 aaKnown RBP9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 LLPHQ9BRT6 129 aaKnown RBP9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 RPAP3Q9H6T3 665 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 RNF186Q9NXI6 227 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 HTTP42858 3142 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 hCG_1984214I3L0E3 225 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 TLR2O60603 784 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 BMP3P12645 472 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 GCLCP48506 637 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 MCM2P49736 904 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 IRF5Q13568 498 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 NPY5RQ15761 445 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 RALYLQ86SE5 291 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms