RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 KCNJ4P48050 445 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 LBX1P52954 281 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 HUNKP57058 714 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 CLDN10P78369 228 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 CCDC57Q2TAC2 916 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 STRIP1Q5VSL9 837 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 LDHAL6AQ6ZMR3 332 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 VGLL2Q8N8G2 317 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 ZCCHC2Q9C0B9 1178 aaKnown RBP6.11□□□□□ -1.43
CDH9-203ENST00000505045 ANKRD2Q9GZV1 360 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 FZD1Q9UP38 647 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 F8W031 263 aaPredicted RBP6.11□□□□□ -1.43
CDH9-203ENST00000505045 GYG1P46976 350 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 TEAD4Q15561 434 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 GRIK5Q16478 980 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 TTLL5Q6EMB2 1281 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 C1orf229Q6ZS94 237 aaPredicted RBP6.11□□□□□ -1.43
CDH9-203ENST00000505045 TRIM50Q86XT4 487 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 TNS4Q8IZW8 715 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 DCPSQ96C86 337 aaKnown RBP6.11□□□□□ -1.43
CDH9-203ENST00000505045 ABHD17AQ96GS6 310 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 ZBED3Q96IU2 234 aaPredicted RBP6.11□□□□□ -1.43
CDH9-203ENST00000505045 OXCT2Q9BYC2 517 aaPredicted RBP6.11□□□□□ -1.43
CDH9-203ENST00000505045 CNNM1Q9NRU3 951 aa6.11□□□□□ -1.43
CDH9-203ENST00000505045 NOB1Q9ULX3 412 aaKnown RBP6.11□□□□□ -1.43
CDH9-203ENST00000505045 IL1R1P14778 569 aa6.1□□□□□ -1.43
CDH9-203ENST00000505045 RFX5P48382 616 aaPredicted RBP6.1□□□□□ -1.43
CDH9-203ENST00000505045 CTBSQ01459 385 aa6.1□□□□□ -1.43
CDH9-203ENST00000505045 ALDH1L2Q3SY69 923 aa6.1□□□□□ -1.43
CDH9-203ENST00000505045 TAF7LQ5H9L4 462 aa6.1□□□□□ -1.43
CDH9-203ENST00000505045 C15orf52Q6ZUT6 534 aaKnown RBP6.1□□□□□ -1.43
CDH9-203ENST00000505045 GBA2Q9HCG7 927 aaPredicted RBP6.1□□□□□ -1.43
CDH9-203ENST00000505045 RIPOR2Q9Y4F9 1068 aa6.1□□□□□ -1.43
CDH9-203ENST00000505045 PCDHGC4Q9Y5F7 938 aa6.1□□□□□ -1.43
CDH9-203ENST00000505045 PITPNM2Q9BZ72 1349 aa6.1□□□□□ -1.43
CDH9-203ENST00000505045 ARID1BQ8NFD5 2236 aaPredicted RBP6.09□□□□□ -1.43
CDH9-203ENST00000505045 A0A1W2PNR3 127 aa6.09□□□□□ -1.43
CDH9-203ENST00000505045 M0R2N6 131 aa6.09□□□□□ -1.43
CDH9-203ENST00000505045 FGFR3P22607 806 aa6.09□□□□□ -1.43
CDH9-203ENST00000505045 ECE1P42892 770 aa6.09□□□□□ -1.43
CDH9-203ENST00000505045 CTCFP49711 727 aaPredicted RBP6.09□□□□□ -1.43
CDH9-203ENST00000505045 RARSP54136 660 aaKnown RBP6.09□□□□□ -1.43
CDH9-203ENST00000505045 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
CDH9-203ENST00000505045 FIGNL1Q6PIW4 674 aa6.09□□□□□ -1.43
CDH9-203ENST00000505045 HHIPL1Q96JK4 782 aa6.09□□□□□ -1.43
CDH9-203ENST00000505045 MEIS3Q99687 375 aa6.09□□□□□ -1.43
CDH9-203ENST00000505045 MYO3BQ8WXR4 1341 aa6.09□□□□□ -1.43
CDH9-203ENST00000505045 CLRN2A0PK11 232 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 EML1O00423 815 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 BCAR3O75815 825 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 TXLNAP40222 546 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 ATP1A2P50993 1020 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 MAP2K1Q02750 393 aaPredicted RBP6.09□□□□□ -1.44
CDH9-203ENST00000505045 PTPN12Q05209 780 aaKnown RBP6.09□□□□□ -1.44
CDH9-203ENST00000505045 TNP2Q05952 138 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 CCDC102BQ68D86 513 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 RGMBQ6NW40 437 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 ZNF804AQ7Z570 1209 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 RASAL3Q86YV0 1011 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 SIX5Q8N196 739 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 GLMNQ92990 594 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 AIDAQ96BJ3 306 aa6.09□□□□□ -1.44
CDH9-203ENST00000505045 FAM84BQ96KN1 310 aaPredicted RBP6.09□□□□□ -1.44
CDH9-203ENST00000505045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.09□□□□□ -1.44
CDH9-203ENST00000505045 SHISA8B8ZZ34 492 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 PRKG1Q13976 671 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 UBE4AQ14139 1066 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 CFAP100Q494V2 611 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 METTL24Q5JXM2 366 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 MFSD14BQ5SR56 506 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 SAMD5Q5TGI4 173 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 ATG9AQ7Z3C6 839 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 NBPF11Q86T75 865 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 SLC9A9Q8IVB4 645 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 OGFOD1Q8N543 542 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 TDRD7Q8NHU6 1098 aaKnown RBP6.08□□□□□ -1.44
CDH9-203ENST00000505045 TPCN2Q8NHX9 752 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 PRMT6Q96LA8 375 aaPredicted RBP6.08□□□□□ -1.44
CDH9-203ENST00000505045 SIL1Q9H173 461 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 SEMA6BQ9H3T3 888 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 ZFP64Q9NPA5 681 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 PRDM10Q9NQV6 1147 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 PA2G4Q9UQ80 394 aaKnown RBP6.08□□□□□ -1.44
CDH9-203ENST00000505045 LRRFIP2Q9Y608 721 aaKnown RBP6.08□□□□□ -1.44
CDH9-203ENST00000505045 FAM205AQ6ZU69 1335 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 MROH5Q6ZUA9 1318 aa6.08□□□□□ -1.44
CDH9-203ENST00000505045 MYO5AQ9Y4I1 1855 aaKnown RBP6.08□□□□□ -1.44
CDH9-203ENST00000505045 UBE2Q2LH0YL09 131 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 ATXN7O15265 892 aaPredicted RBP6.07□□□□□ -1.44
CDH9-203ENST00000505045 PDE8BO95263 885 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 FAM157BP0CG42 384 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 TRIM27P14373 513 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 HOXB4P17483 251 aaPredicted RBP6.07□□□□□ -1.44
CDH9-203ENST00000505045 FGFR2P21802 821 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 NOS2P35228 1153 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 MAP2K2P36507 400 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 ZNF157P51786 506 aaPredicted RBP6.07□□□□□ -1.44
CDH9-203ENST00000505045 KIF23Q02241 960 aaPredicted RBP6.07□□□□□ -1.44
CDH9-203ENST00000505045 NOGQ13253 232 aa6.07□□□□□ -1.44
CDH9-203ENST00000505045 DIEXFQ68CQ4 756 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms