RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 USP17L12C9JPN9 530 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 USP17L21D6R901 530 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 PGK2P07205 417 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 EEF2P13639 858 aaKnown RBP14.57□□□□□ -0.08
NEDD9-209ENST00000504634 ADD2P35612 726 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 TLE2Q04725 743 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 SNX17Q15036 470 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 C12orf60Q5U649 245 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 RNF180Q86T96 592 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 CDX2Q99626 313 aaPredicted RBP14.57□□□□□ -0.08
NEDD9-209ENST00000504634 KANSL2Q9H9L4 492 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 GOPCQ9HD26 462 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 PDLIM7Q9NR12 457 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 NRBP1Q9UHY1 535 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 TACC3Q9Y6A5 838 aa14.57□□□□□ -0.08
NEDD9-209ENST00000504634 TRIM43BA6NCK2 446 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 RAB11FIP3O75154 756 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 STAT3P40763 770 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 SLFNL1Q499Z3 407 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 SH3RF1Q7Z6J0 888 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 RIOX2Q8IUF8 465 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 TRIM43Q96BQ3 446 aaPredicted RBP14.56□□□□□ -0.08
NEDD9-209ENST00000504634 TINF2Q9BSI4 451 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 SEMA6BQ9H3T3 888 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 FBXO28Q9NVF7 368 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 PHF24Q9UPV7 400 aa14.56□□□□□ -0.08
NEDD9-209ENST00000504634 VWA5AO00534 786 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 PQBP1O60828 265 aaKnown RBP14.55□□□□□ -0.08
NEDD9-209ENST00000504634 PGK1P00558 417 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 CLTBP09497 229 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 ATP5JP18859 108 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 COPB2P35606 906 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 SMAD3P84022 425 aaKnown RBP14.55□□□□□ -0.08
NEDD9-209ENST00000504634 C1orf53Q5VUE5 145 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 C16orf86Q6ZW13 317 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 PPP1R9AQ9ULJ8 1098 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 CNPY2Q9Y2B0 182 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 DIS3Q9Y2L1 958 aaKnown RBP14.55□□□□□ -0.08
NEDD9-209ENST00000504634 SLC4A4Q9Y6R1 1079 aa14.55□□□□□ -0.08
NEDD9-209ENST00000504634 DNAH12Q6ZR08 3092 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 SMIM22K7EJ46 135 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 AKR1A1P14550 325 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 RAG1P15918 1043 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 UBE3CQ15386 1083 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 ZNF792Q3KQV3 632 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 FAM83BQ5T0W9 1011 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 ZSCAN25Q6NSZ9 544 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 MAFAQ8NHW3 353 aaPredicted RBP14.54□□□□□ -0.08
NEDD9-209ENST00000504634 RNPC3Q96LT9 517 aaKnown RBP14.54□□□□□ -0.08
NEDD9-209ENST00000504634 HAUS7Q99871 368 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 DDX19BQ9UMR2 479 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 ADAMTS5Q9UNA0 930 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 VCANP13611 3396 aa14.54□□□□□ -0.08
NEDD9-209ENST00000504634 NAV1Q8NEY1 1877 aa14.53□□□□□ -0.08
NEDD9-209ENST00000504634 TAL1P17542 331 aaPredicted RBP14.53□□□□□ -0.08
NEDD9-209ENST00000504634 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
NEDD9-209ENST00000504634 MYLIPQ8WY64 445 aa14.53□□□□□ -0.08
NEDD9-209ENST00000504634 TMEM39AQ9NV64 488 aa14.53□□□□□ -0.08
NEDD9-209ENST00000504634 CTDP1Q9Y5B0 961 aaPredicted RBP14.53□□□□□ -0.08
NEDD9-209ENST00000504634 ZNF236Q9UL36 1845 aa14.52□□□□□ -0.08
NEDD9-209ENST00000504634 ZBED9Q6R2W3 1325 aa14.52□□□□□ -0.08
NEDD9-209ENST00000504634 A0A1W2PQ45 241 aaPredicted RBP14.52□□□□□ -0.09
NEDD9-209ENST00000504634 A0A1W2PQY0 241 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 CHGBP05060 677 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 ZNF865P0CJ78 1059 aaPredicted RBP14.52□□□□□ -0.09
NEDD9-209ENST00000504634 FOSL2P15408 326 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 CTR9Q6PD62 1173 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 SIRT2Q8IXJ6 389 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 NUP133Q8WUM0 1156 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 LENG1Q96BZ8 264 aaPredicted RBP14.52□□□□□ -0.09
NEDD9-209ENST00000504634 DDX11Q96FC9 970 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 SLF1Q9BQI6 1058 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 TEX13BQ9BXU2 312 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 CHMP4BQ9H444 224 aaKnown RBP14.52□□□□□ -0.09
NEDD9-209ENST00000504634 MKNK2Q9HBH9 465 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 STARD7Q9NQZ5 370 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 ARPP21Q9UBL0 812 aaPredicted RBP14.52□□□□□ -0.09
NEDD9-209ENST00000504634 ZNF214Q9UL59 606 aaPredicted RBP14.52□□□□□ -0.09
NEDD9-209ENST00000504634 COG6Q9Y2V7 657 aa14.52□□□□□ -0.09
NEDD9-209ENST00000504634 LAMA2P24043 3122 aaKnown RBP14.51□□□□□ -0.09
NEDD9-209ENST00000504634 FRMPD3Q5JV73 1810 aa14.51□□□□□ -0.09
NEDD9-209ENST00000504634 DCDC2CA8MYV0 355 aa14.51□□□□□ -0.09
NEDD9-209ENST00000504634 KIAA0355O15063 1070 aa14.51□□□□□ -0.09
NEDD9-209ENST00000504634 ITGB8P26012 769 aa14.51□□□□□ -0.09
NEDD9-209ENST00000504634 FPGSQ05932 587 aa14.51□□□□□ -0.09
NEDD9-209ENST00000504634 SNRNP48Q6IEG0 339 aaKnown RBP14.51□□□□□ -0.09
NEDD9-209ENST00000504634 STK11IPQ8N1F8 1099 aa14.51□□□□□ -0.09
NEDD9-209ENST00000504634 NUP88Q99567 741 aaPredicted RBP14.51□□□□□ -0.09
NEDD9-209ENST00000504634 PUS7LQ9H0K6 701 aaKnown RBP14.51□□□□□ -0.09
NEDD9-209ENST00000504634 TTYH1Q9H313 450 aaPredicted RBP14.51□□□□□ -0.09
NEDD9-209ENST00000504634 ZBTB40Q9NUA8 1239 aa14.51□□□□□ -0.09
NEDD9-209ENST00000504634 ZHX1Q9UKY1 873 aaPredicted RBP14.51□□□□□ -0.09
NEDD9-209ENST00000504634 FAM184BQ9ULE4 1060 aa14.51□□□□□ -0.09
NEDD9-209ENST00000504634 SPTBN5Q9NRC6 3674 aaKnown RBP14.51□□□□□ -0.09
NEDD9-209ENST00000504634 A0A0G2JMZ2 1700 aa14.5□□□□□ -0.09
NEDD9-209ENST00000504634 EPHB4P54760 987 aa14.5□□□□□ -0.09
NEDD9-209ENST00000504634 MSL3Q8N5Y2 521 aaKnown RBP14.5□□□□□ -0.09
NEDD9-209ENST00000504634 REPS2Q8NFH8 660 aa14.5□□□□□ -0.09
NEDD9-209ENST00000504634 TSEN34Q9BSV6 310 aaKnown RBP14.5□□□□□ -0.09
NEDD9-209ENST00000504634 ROBO3Q96MS0 1386 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms