RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 SLC22A31A6NKX4 558 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 PEX10O60683 326 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 GARTP22102 1010 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 GALK1P51570 392 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 RNF4P78317 190 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 DLG4P78352 724 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 RNF111Q6ZNA4 994 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 SYTL5Q8TDW5 730 aaPredicted RBP6.98□□□□□ -1.29
SUB1-204ENST00000504016 LINC01599Q8WXQ3 324 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 ZNF428Q96B54 188 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 IRF2BPLQ9H1B7 796 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 ZNF552Q9H707 407 aaPredicted RBP6.98□□□□□ -1.29
SUB1-204ENST00000504016 ZMYM5Q9UJ78 669 aa6.98□□□□□ -1.29
SUB1-204ENST00000504016 ROBO2Q9HCK4 1378 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 MYOCOSA0A1B0GUC4 107 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 SSU72P8A0A1W2PR75 194 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 SEMA7AO75326 666 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 FBXL19Q6PCT2 694 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 TTLL10Q6ZVT0 673 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 WAPLQ7Z5K2 1190 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 SIRT2Q8IXJ6 389 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 USHBP1Q8N6Y0 703 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.97□□□□□ -1.29
SUB1-204ENST00000504016 BRMS1Q9HCU9 246 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 COPRSQ9NQ92 184 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 PCDHB14Q9Y5E9 798 aa6.97□□□□□ -1.29
SUB1-204ENST00000504016 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.3
SUB1-204ENST00000504016 UBOX5O94941 541 aa6.96□□□□□ -1.3
SUB1-204ENST00000504016 EIF4A3P38919 411 aaKnown RBP6.96□□□□□ -1.3
SUB1-204ENST00000504016 SLC14A2Q15849 920 aa6.96□□□□□ -1.3
SUB1-204ENST00000504016 DAGLBQ8NCG7 672 aa6.96□□□□□ -1.3
SUB1-204ENST00000504016 HDAC8Q9BY41 377 aa6.96□□□□□ -1.3
SUB1-204ENST00000504016 FOXP3Q9BZS1 431 aa6.96□□□□□ -1.3
SUB1-204ENST00000504016 GMIPQ9P107 970 aa6.96□□□□□ -1.3
SUB1-204ENST00000504016 ZNF281Q9Y2X9 895 aa6.96□□□□□ -1.3
SUB1-204ENST00000504016 SUPT16HQ9Y5B9 1047 aaKnown RBP6.96□□□□□ -1.3
SUB1-204ENST00000504016 TEX51A0A1B0GUA7 166 aa6.95□□□□□ -1.3
SUB1-204ENST00000504016 INHBBP09529 407 aa6.95□□□□□ -1.3
SUB1-204ENST00000504016 PCBP3P57721 371 aaKnown RBP6.95□□□□□ -1.3
SUB1-204ENST00000504016 ERMP1Q7Z2K6 904 aa6.95□□□□□ -1.3
SUB1-204ENST00000504016 ZNF655Q8N720 491 aaPredicted RBP6.95□□□□□ -1.3
SUB1-204ENST00000504016 SHISA4Q96DD7 197 aa6.95□□□□□ -1.3
SUB1-204ENST00000504016 TCTN2Q96GX1 697 aa6.95□□□□□ -1.3
SUB1-204ENST00000504016 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
SUB1-204ENST00000504016 SGPP1Q9BX95 441 aa6.95□□□□□ -1.3
SUB1-204ENST00000504016 TCFL5Q9UL49 500 aa6.95□□□□□ -1.3
SUB1-204ENST00000504016 CNOT6Q9ULM6 557 aaKnown RBP6.95□□□□□ -1.3
SUB1-204ENST00000504016 OR14I1A6ND48 311 aa6.94□□□□□ -1.3
SUB1-204ENST00000504016 USP2O75604 605 aaPredicted RBP6.94□□□□□ -1.3
SUB1-204ENST00000504016 RAD51AP2Q09MP3 1159 aa6.94□□□□□ -1.3
SUB1-204ENST00000504016 NBPF9Q3BBW0 867 aa6.94□□□□□ -1.3
SUB1-204ENST00000504016 ADGRF1Q5T601 910 aa6.94□□□□□ -1.3
SUB1-204ENST00000504016 NBPF12Q5TAG4 269 aaPredicted RBP6.94□□□□□ -1.3
SUB1-204ENST00000504016 TMC3Q7Z5M5 1100 aa6.94□□□□□ -1.3
SUB1-204ENST00000504016 LRRC3Q9BY71 257 aa6.94□□□□□ -1.3
SUB1-204ENST00000504016 RAPGEFL1Q9UHV5 662 aa6.94□□□□□ -1.3
SUB1-204ENST00000504016 NOTOA8MTQ0 251 aa6.93□□□□□ -1.3
SUB1-204ENST00000504016 GREM1O60565 184 aa6.93□□□□□ -1.3
SUB1-204ENST00000504016 ATE1O95260 518 aa6.93□□□□□ -1.3
SUB1-204ENST00000504016 OVOS1Q6IE37 1185 aa6.93□□□□□ -1.3
SUB1-204ENST00000504016 CEP128Q6ZU80 1094 aa6.93□□□□□ -1.3
SUB1-204ENST00000504016 NLRX1Q86UT6 975 aa6.93□□□□□ -1.3
SUB1-204ENST00000504016 ZNF296Q8WUU4 475 aaPredicted RBP6.93□□□□□ -1.3
SUB1-204ENST00000504016 MAP6Q96JE9 813 aa6.93□□□□□ -1.3
SUB1-204ENST00000504016 UNCXA6NJT0 531 aa6.92□□□□□ -1.3
SUB1-204ENST00000504016 FKTNO75072 461 aa6.92□□□□□ -1.3
SUB1-204ENST00000504016 SYPP08247 313 aa6.92□□□□□ -1.3
SUB1-204ENST00000504016 POLR2BP30876 1174 aaKnown RBP6.92□□□□□ -1.3
SUB1-204ENST00000504016 KIR2DL1P43626 348 aaPredicted RBP6.92□□□□□ -1.3
SUB1-204ENST00000504016 KIR2DL2P43627 348 aaPredicted RBP6.92□□□□□ -1.3
SUB1-204ENST00000504016 SNW1Q13573 536 aaKnown RBP6.92□□□□□ -1.3
SUB1-204ENST00000504016 ZNF385BQ569K4 471 aa6.92□□□□□ -1.3
SUB1-204ENST00000504016 CDCP2Q5VXM1 449 aa6.92□□□□□ -1.3
SUB1-204ENST00000504016 LINC00116Q8NCU8 138 aa6.92□□□□□ -1.3
SUB1-204ENST00000504016 GCM1Q9NP62 436 aa6.92□□□□□ -1.3
SUB1-204ENST00000504016 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
SUB1-204ENST00000504016 NRDCO43847 1150 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 CLEC3AO75596 197 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 PRAMEF1O95521 474 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 CRKP46108 304 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 SEZ6Q53EL9 994 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 GK5Q6ZS86 529 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 TMEM87AQ8NBN3 555 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 ATG4CQ96DT6 458 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 ZNF512BQ96KM6 892 aaPredicted RBP6.91□□□□□ -1.3
SUB1-204ENST00000504016 CNNM2Q9H8M5 875 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 EHMT1Q9H9B1 1298 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 GGT7Q9UJ14 662 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 KCTD3Q9Y597 815 aa6.91□□□□□ -1.3
SUB1-204ENST00000504016 TMEM82A0PJX8 343 aa6.9□□□□□ -1.3
SUB1-204ENST00000504016 B8ZZF3 427 aa6.9□□□□□ -1.3
SUB1-204ENST00000504016 RFXAPO00287 272 aa6.9□□□□□ -1.3
SUB1-204ENST00000504016 PRRG2O14669 202 aa6.9□□□□□ -1.3
SUB1-204ENST00000504016 EFEMP2O95967 443 aa6.9□□□□□ -1.3
SUB1-204ENST00000504016 BMP7P18075 431 aa6.9□□□□□ -1.3
SUB1-204ENST00000504016 MCM4P33991 863 aa6.9□□□□□ -1.3
SUB1-204ENST00000504016 RBM25P49756 843 aaKnown RBP6.9□□□□□ -1.3
SUB1-204ENST00000504016 CTSWP56202 376 aa6.9□□□□□ -1.3
SUB1-204ENST00000504016 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
SUB1-204ENST00000504016 MRPL58Q14197 206 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms