RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 CTAGE15A4D2H0 777 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 WNT7AO00755 349 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 ZBTB22O15209 634 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 PRDM1O75626 825 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 CAMTA2O94983 1202 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 CTAGE8P0CG41 777 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 SCG2P13521 617 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 CALML3P27482 149 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 SLC20A2Q08357 652 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 PFKFB3Q16875 520 aaPredicted RBP16.9■□□□□ 0.3
SNF8-203ENST00000504000 WDR93Q6P2C0 686 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 CTAGE6Q86UF2 777 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 CTAGE4Q8IX94 777 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 SLC35F6Q8N357 371 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 SH3GLB2Q9NR46 395 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 CCDC87Q9NVE4 849 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 ADAM21Q9UKJ8 722 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 KCNJ18B7U540 433 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 CASP1P29466 404 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 AMPD2Q01433 879 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 KCNJ12Q14500 433 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 KCNB1Q14721 858 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 SMYD4Q8IYR2 804 aaPredicted RBP16.9■□□□□ 0.3
SNF8-203ENST00000504000 MTRQ99707 1265 aa16.9■□□□□ 0.3
SNF8-203ENST00000504000 ZCCHC17Q9NP64 241 aaKnown RBP16.9■□□□□ 0.3
SNF8-203ENST00000504000 EXOC5O00471 708 aa16.89■□□□□ 0.29
SNF8-203ENST00000504000 RPN1P04843 607 aaKnown RBP16.89■□□□□ 0.29
SNF8-203ENST00000504000 EEF1GP26641 437 aaKnown RBP16.89■□□□□ 0.29
SNF8-203ENST00000504000 ST5P78524 1137 aa16.89■□□□□ 0.29
SNF8-203ENST00000504000 CTR9Q6PD62 1173 aa16.89■□□□□ 0.29
SNF8-203ENST00000504000 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.29
SNF8-203ENST00000504000 NELFBQ8WX92 580 aa16.89■□□□□ 0.29
SNF8-203ENST00000504000 NUP88Q99567 741 aaPredicted RBP16.89■□□□□ 0.29
SNF8-203ENST00000504000 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.29
SNF8-203ENST00000504000 PSMD14O00487 310 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 KRT9P35527 623 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 C4orf32Q8N8J7 132 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 PNKPQ96T60 521 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 DNAJC7Q99615 494 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 BTG4Q9NY30 223 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 ABCF2Q9UG63 623 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 PUF60Q9UHX1 559 aaKnown RBP16.88■□□□□ 0.29
SNF8-203ENST00000504000 MYO6Q9UM54 1294 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 EPN1Q9Y6I3 576 aaPredicted RBP16.88■□□□□ 0.29
SNF8-203ENST00000504000 A0A0U1RQJ8 604 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 MCM3P25205 808 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 KIF5BP33176 963 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 CCT6AP40227 531 aaKnown RBP16.88■□□□□ 0.29
SNF8-203ENST00000504000 NLRP5P59047 1200 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 IL17AQ16552 155 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 CAVIN4Q5BKX8 364 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 ADSSL1Q8N142 457 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 ACRBPQ8NEB7 543 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 OR8K1Q8NGG5 319 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 GOLGA5Q8TBA6 731 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 ATRIPQ8WXE1 791 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 RPGRIP1Q96KN7 1286 aa16.88■□□□□ 0.29
SNF8-203ENST00000504000 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
SNF8-203ENST00000504000 H3BQF6 201 aa16.87■□□□□ 0.29
SNF8-203ENST00000504000 NDUFA10O95299 355 aa16.87■□□□□ 0.29
SNF8-203ENST00000504000 WWC2Q6AWC2 1192 aa16.87■□□□□ 0.29
SNF8-203ENST00000504000 NOC3LQ8WTT2 800 aaKnown RBP16.87■□□□□ 0.29
SNF8-203ENST00000504000 VPS16Q9H269 839 aa16.87■□□□□ 0.29
SNF8-203ENST00000504000 ACBD3Q9H3P7 528 aa16.87■□□□□ 0.29
SNF8-203ENST00000504000 THAP9Q9H5L6 903 aa16.87■□□□□ 0.29
SNF8-203ENST00000504000 VIPAS39Q9H9C1 493 aa16.87■□□□□ 0.29
SNF8-203ENST00000504000 ATP8A2Q9NTI2 1148 aa16.87■□□□□ 0.29
SNF8-203ENST00000504000 BSDC1Q9NW68 430 aaPredicted RBP16.87■□□□□ 0.29
SNF8-203ENST00000504000 CWC15Q9P013 229 aaKnown RBP16.87■□□□□ 0.29
SNF8-203ENST00000504000 LGALS16A8MUM7 142 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 RPS6KA5O75582 802 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 SF3B3Q15393 1217 aaKnown RBP16.86■□□□□ 0.29
SNF8-203ENST00000504000 GALNT17Q6IS24 598 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 PIK3AP1Q6ZUJ8 805 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 TRAPPC11Q7Z392 1133 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 EHBP1Q8NDI1 1231 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 ZNF507Q8TCN5 953 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 BLZF1Q9H2G9 400 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 ZSWIM4Q9H7M6 989 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 ABCB6Q9NP58 842 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 CAPN11Q9UMQ6 739 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 COL1A1P02452 1464 aaPredicted RBP16.86■□□□□ 0.29
SNF8-203ENST00000504000 SCN7AQ01118 1682 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 hCG_1642624A0A1W2PR95 340 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 LAD1O00515 517 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 PRCPP42785 496 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 ZSCAN26Q16670 478 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 NOM1Q5C9Z4 860 aaKnown RBP16.86■□□□□ 0.29
SNF8-203ENST00000504000 IRF2BP1Q8IU81 584 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 MB21D1Q8N884 522 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 RETREG2Q8NC44 543 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 NEK11Q8NG66 645 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 MAGEF1Q9HAY2 307 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 MED4Q9NPJ6 270 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 DISC1Q9NRI5 854 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 LUC7L2Q9Y383 392 aaKnown RBP16.86■□□□□ 0.29
SNF8-203ENST00000504000 A0A1B0GUL6 1792 aa16.86■□□□□ 0.29
SNF8-203ENST00000504000 USP17L12C9JPN9 530 aa16.85■□□□□ 0.29
SNF8-203ENST00000504000 USP17L21D6R901 530 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms