RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PTMAP06454 111 aaKnown RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 TATP17735 454 aaPredicted RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 GSTT1P30711 240 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 KCNJ6P48051 423 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 EVCP57679 992 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 KRT85P78386 507 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 AMOTQ4VCS5 1084 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 C4orf17Q53FE4 359 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 PRPF40BQ6NWY9 871 aaKnown RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 JAZF1Q86VZ6 243 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 ZNF280CQ8ND82 737 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 ENGASEQ8NFI3 743 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 MRFAP1L1Q96HT8 127 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 SEC16BQ96JE7 1060 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 HSH2DQ96JZ2 352 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 JAKMIP1Q96N16 626 aaKnown RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 GRIP2Q9C0E4 1043 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 ELP3Q9H9T3 547 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 KBTBD4Q9NVX7 518 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 DBF4Q9UBU7 674 aaPredicted RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 PAXBP1Q9Y5B6 917 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 WDR17Q8IZU2 1322 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 SPEF2Q9C093 1822 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 PI4KAP2A4QPH2 592 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 ATP5JP18859 108 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 INPP5BP32019 993 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 NMIQ13287 307 aaPredicted RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 RABL6Q3YEC7 729 aaPredicted RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 NAA16Q6N069 864 aaPredicted RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 ZSCAN25Q6NSZ9 544 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 CWC27Q6UX04 472 aaKnown RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 KIAA0825Q8IV33 1275 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 CLASRPQ8N2M8 674 aaKnown RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 PDCL2Q8N4E4 241 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 PI4KAP1Q8N8J0 262 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 LINS1Q8NG48 757 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 AIDAQ96BJ3 306 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 EAF2Q96CJ1 260 aaPredicted RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 BPIFA3Q9BQP9 254 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 NUP62CLQ9H1M0 184 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 ZSCAN16Q9H4T2 348 aaPredicted RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 LGR6Q9HBX8 967 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 OGFRQ9NZT2 677 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 CHPF2Q9P2E5 772 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 CTNNA3Q9UI47 895 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 RTCBQ9Y3I0 505 aaKnown RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 SALL1Q9NSC2 1324 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 SCN11AQ9UI33 1791 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 CTAGE5O15320 804 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 KCNQ3O43525 872 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 SSBP05455 408 aaKnown RBP eCLIP4.57□□□□□ -1.68
CLTC-209ENST00000498711 CPA1P15085 419 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 EXOSC10Q01780 885 aaKnown RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 NCBP1Q09161 790 aaKnown RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 COL9A3Q14050 684 aaPredicted RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 KRT32Q14532 448 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 LARP1BQ659C4 914 aaKnown RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 CDC37L1Q7L3B6 337 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 BTLAQ7Z6A9 289 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 GALNT12Q8IXK2 581 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 CMTR1Q8N1G2 835 aaKnown RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 C17orf53Q8N3J3 647 aaPredicted RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 JARID2Q92833 1246 aaPredicted RBP4.57□□□□□ -1.68
CLTC-209ENST00000498711 GTF3C6Q969F1 213 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 GPATCH3Q96I76 525 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 SUCLG2Q96I99 432 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 SPACA7Q96KW9 195 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 SPON2Q9BUD6 331 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 USP20Q9Y2K6 914 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 KCNMB2Q9Y691 235 aa4.57□□□□□ -1.68
CLTC-209ENST00000498711 LAMA4Q16363 1823 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 PFKFB2O60825 505 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 MAP4K4O95819 1239 aaPredicted RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 TUBB4AP04350 444 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 GABPB1Q06547 395 aaPredicted RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 SNW1Q13573 536 aaKnown RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 PWP1Q13610 501 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 TCEAL1Q15170 157 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 FAM196AQ6ZSG2 479 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 KRT27Q7Z3Y8 459 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 CARD10Q9BWT7 1032 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 KLF16Q9BXK1 252 aaPredicted RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 OSBPL5Q9H0X9 879 aaPredicted RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 SUV39H2Q9H5I1 410 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 NEUROD4Q9HD90 331 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 TTF2Q9UNY4 1162 aaKnown RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 DOT1LQ8TEK3 1739 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 FIBPO43427 364 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 CLSTN1O94985 981 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 EPB42P16452 691 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 ZKSCAN1P17029 563 aaPredicted RBP4.56□□□□□ -1.68
CLTC-209ENST00000498711 PTGS1P23219 599 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 CASP7P55210 303 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 SERINC3Q13530 473 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 GRM2Q14416 872 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 CCDC93Q567U6 631 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 BICDL1Q6ZP65 573 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 ARHGEF25Q86VW2 580 aa4.56□□□□□ -1.68
CLTC-209ENST00000498711 EMID1Q96A84 441 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms