RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 PKN1Q16512 942 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 LONRF2Q1L5Z9 754 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 USP49Q70CQ1 688 aa18.6■□□□□ 0.57
COL6A1-206ENST00000498614 H3BQF6 201 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 EARS2Q5JPH6 523 aaKnown RBP18.59■□□□□ 0.57
COL6A1-206ENST00000498614 CTR9Q6PD62 1173 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 BRIP1Q9BX63 1249 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 CSRNP2Q9H175 543 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 LZTFL1Q9NQ48 299 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 DACH1Q9UI36 760 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 SRPRBQ9Y5M8 271 aaKnown RBP18.59■□□□□ 0.57
COL6A1-206ENST00000498614 UTRNP46939 3433 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 USP17L12C9JPN9 530 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 USP17L21D6R901 530 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 TEX33O43247 280 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 SLC15A2Q16348 729 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 CATIPQ7Z7H3 387 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 CEP131Q9UPN4 1083 aa18.59■□□□□ 0.57
COL6A1-206ENST00000498614 V9GY48 417 aaPredicted RBP18.59■□□□□ 0.57
COL6A1-206ENST00000498614 AKR1B15C9JRZ8 316 aaPredicted RBP18.58■□□□□ 0.56
COL6A1-206ENST00000498614 CCDC175P0C221 793 aa18.58■□□□□ 0.56
COL6A1-206ENST00000498614 RAD9BQ6WBX8 426 aa18.58■□□□□ 0.56
COL6A1-206ENST00000498614 IQCA1Q86XH1 822 aa18.58■□□□□ 0.56
COL6A1-206ENST00000498614 A0A1B0GTH6 734 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 ACTN4O43707 911 aaKnown RBP18.57■□□□□ 0.56
COL6A1-206ENST00000498614 XBP1P17861 261 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 FUT2Q10981 343 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 NSUN4Q96CB9 384 aaKnown RBP18.57■□□□□ 0.56
COL6A1-206ENST00000498614 AATFQ9NY61 560 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL6A1-206ENST00000498614 KRT2P35908 639 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 PLCD1P51178 756 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 CHMP4BP1P59074 171 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 MECOMQ03112 1051 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 GPS2Q13227 327 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 MUM1L1Q5H9M0 696 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 APTXQ7Z2E3 356 aaKnown RBP18.57■□□□□ 0.56
COL6A1-206ENST00000498614 ZNF579Q8NAF0 562 aaKnown RBP18.57■□□□□ 0.56
COL6A1-206ENST00000498614 PHF20Q9BVI0 1012 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 PUF60Q9UHX1 559 aaKnown RBP18.57■□□□□ 0.56
COL6A1-206ENST00000498614 ADGRG1Q9Y653 693 aa18.57■□□□□ 0.56
COL6A1-206ENST00000498614 MYH13Q9UKX3 1938 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 CCDC151A5D8V7 595 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 NMT2O60551 498 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 PPP2R5BQ15173 497 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 SRGAP1Q7Z6B7 1085 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 FBXO33Q7Z6M2 555 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 PANX2Q96RD6 677 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 JAG2Q9Y219 1238 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 TRIM75PA6NK02 468 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 MAP2K7O14733 419 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 PRPF3O43395 683 aaKnown RBP18.56■□□□□ 0.56
COL6A1-206ENST00000498614 RBL2Q08999 1139 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 TROAPQ12815 778 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 BRD3Q15059 726 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 JAKMIP3Q5VZ66 844 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 TRIML1Q8N9V2 468 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 CPLX3Q8WVH0 158 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 ANKZF1Q9H8Y5 726 aa18.56■□□□□ 0.56
COL6A1-206ENST00000498614 VGLL3A8MV65 326 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 WNT7AO00755 349 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 RPS8P62241 208 aaKnown RBP18.55■□□□□ 0.56
COL6A1-206ENST00000498614 NOM1Q5C9Z4 860 aaKnown RBP18.55■□□□□ 0.56
COL6A1-206ENST00000498614 FAM47AQ5JRC9 791 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 TPTE2Q6XPS3 522 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 ADAM21Q9UKJ8 722 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 PRDX5P30044 214 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 DDR1Q08345 913 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 ZSCAN26Q16670 478 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 ZBTB9Q96C00 473 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 RBM28Q9NW13 759 aaKnown RBP18.55■□□□□ 0.56
COL6A1-206ENST00000498614 STK32BQ9NY57 414 aa18.55■□□□□ 0.56
COL6A1-206ENST00000498614 FEZ2Q9UHY8 353 aaPredicted RBP18.55■□□□□ 0.56
COL6A1-206ENST00000498614 A0A087X0B3 334 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 CYP2D6P10635 497 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 SLC10A5Q5PT55 438 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 IGSF22Q8N9C0 903 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 SPATA20Q8TB22 786 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 EPSTI1Q96J88 318 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 PNKPQ96T60 521 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 FGRP09769 529 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 ERCC5P28715 1186 aaPredicted RBP18.54■□□□□ 0.56
COL6A1-206ENST00000498614 TM4SF1P30408 202 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 HIBADHP31937 336 aaKnown RBP18.54■□□□□ 0.56
COL6A1-206ENST00000498614 STX17P56962 302 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 KLHL10Q6JEL2 608 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 NLRP3Q96P20 1036 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 DCP1AQ9NPI6 582 aaPredicted RBP18.54■□□□□ 0.56
COL6A1-206ENST00000498614 CDC23Q9UJX2 597 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 DLEC1Q9Y238 1755 aa18.54■□□□□ 0.56
COL6A1-206ENST00000498614 SERPINB2P05120 415 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 CD44P16070 742 aaKnown RBP18.53■□□□□ 0.56
COL6A1-206ENST00000498614 LMAN1P49257 510 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 SLC20A2Q08357 652 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 BEND6Q5SZJ8 279 aaPredicted RBP18.53■□□□□ 0.56
COL6A1-206ENST00000498614 TMTC3Q6ZXV5 915 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 PPFIBP1Q86W92 1011 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 EXOC4Q96A65 974 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL6A1-206ENST00000498614 KIF5CO60282 957 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms