RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 PPM1BO75688 479 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 GABREP78334 506 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 MCL1Q07820 350 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 FAM50AQ14320 339 aaKnown RBP8.12□□□□□ -1.11
PMPCB-208ENST00000498530 NKG7Q16617 165 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 RNF219Q5W0B1 726 aaPredicted RBP8.12□□□□□ -1.11
PMPCB-208ENST00000498530 CNNM4Q6P4Q7 775 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 TRIM59Q8IWR1 403 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 CCDC144CPQ8IYA2 1237 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 DTWD1Q8N5C7 304 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 ZNF417Q8TAU3 575 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 FANCD2OSQ96PS1 177 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 ZNF587Q96SQ5 575 aaPredicted RBP8.12□□□□□ -1.11
PMPCB-208ENST00000498530 FAM86C1Q9NVL1 165 aa8.12□□□□□ -1.11
PMPCB-208ENST00000498530 MEGF11A6BM72 1044 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 SPDYE3A6NKU9 549 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
PMPCB-208ENST00000498530 RASGRP1O95267 797 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 ASLP04424 464 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 NEFMP07197 916 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 GRIA2P42262 883 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 GORABQ5T7V8 394 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 POMZP3Q6PJE2 187 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 STRA8Q7Z7C7 330 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 SLC7A14Q8TBB6 771 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 BAHD1Q8TBE0 780 aaPredicted RBP8.11□□□□□ -1.11
PMPCB-208ENST00000498530 GSX1Q9H4S2 264 aaPredicted RBP8.11□□□□□ -1.11
PMPCB-208ENST00000498530 SLC52A2Q9HAB3 445 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 SUGCTQ9HAC7 445 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 RAD18Q9NS91 495 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 EMC9Q9Y3B6 208 aa8.11□□□□□ -1.11
PMPCB-208ENST00000498530 A0A087WZG4 1122 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 SHOXO15266 292 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 DDX3YO15523 660 aaKnown RBP8.1□□□□□ -1.11
PMPCB-208ENST00000498530 BRINP1O60477 761 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 EIF5BO60841 1220 aaKnown RBP8.1□□□□□ -1.11
PMPCB-208ENST00000498530 NID1P14543 1247 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 CD247P20963 164 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 PPP2R5AQ15172 486 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 PRAMEF13Q5VWM6 474 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 DCAF15Q66K64 600 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 BRAPQ7Z569 592 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 FGD4Q96M96 766 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 DPH2Q9BQC3 489 aaPredicted RBP8.1□□□□□ -1.11
PMPCB-208ENST00000498530 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 ENAMQ9NRM1 1142 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 KCNK4Q9NYG8 393 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 ZNF451Q9Y4E5 1061 aa8.1□□□□□ -1.11
PMPCB-208ENST00000498530 COL17A1Q9UMD9 1497 aaPredicted RBP8.1□□□□□ -1.11
PMPCB-208ENST00000498530 NOP56O00567 594 aaKnown RBP8.09□□□□□ -1.11
PMPCB-208ENST00000498530 GPR39O43194 453 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 TBX1O43435 398 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 PEX14O75381 377 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 DEAF1O75398 565 aaPredicted RBP8.09□□□□□ -1.11
PMPCB-208ENST00000498530 RNF4P78317 190 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 MAP4K2Q12851 820 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 COL9A3Q14050 684 aaPredicted RBP8.09□□□□□ -1.11
PMPCB-208ENST00000498530 NBPF12Q5TAG4 269 aaPredicted RBP8.09□□□□□ -1.11
PMPCB-208ENST00000498530 PKN3Q6P5Z2 889 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 C8orf86Q6ZUL3 223 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 CHSY3Q70JA7 882 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 CDC37L1Q7L3B6 337 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 EXOC8Q8IYI6 725 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 C7orf61Q8IZ16 206 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 ARHGEF39Q8N4T4 335 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 GALNT6Q8NCL4 622 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 MORC4Q8TE76 937 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 PPP1R13LQ8WUF5 828 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 TSR2Q969E8 191 aaKnown RBP8.09□□□□□ -1.11
PMPCB-208ENST00000498530 VWCEQ96DN2 955 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 PSMG3-AS1Q96PY0 264 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 ORAI3Q9BRQ5 295 aa8.09□□□□□ -1.11
PMPCB-208ENST00000498530 DLX3O60479 287 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 ADH5P11766 374 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 ITGA4P13612 1032 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 IGFALSP35858 605 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 GNALP38405 381 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 NEK2P51955 445 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 MAMDC2Q7Z304 686 aaPredicted RBP8.08□□□□□ -1.12
PMPCB-208ENST00000498530 ANKLE2Q86XL3 938 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 SPATS2Q86XZ4 545 aaKnown RBP8.08□□□□□ -1.12
PMPCB-208ENST00000498530 Q8N3U1 123 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 SMG8Q8ND04 991 aaKnown RBP8.08□□□□□ -1.12
PMPCB-208ENST00000498530 WDR66Q8TBY9 1149 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 UBASH3BQ8TF42 649 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 LEO1Q8WVC0 666 aaPredicted RBP8.08□□□□□ -1.12
PMPCB-208ENST00000498530 PTPRN2Q92932 1015 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 PPP1R14AQ96A00 147 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 MKRN2Q9H000 416 aaKnown RBP8.08□□□□□ -1.12
PMPCB-208ENST00000498530 GP6Q9HCN6 339 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 LRRC4BQ9NT99 713 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 SLC5A4Q9NY91 659 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 PRR13Q9NZ81 148 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 NDOR1Q9UHB4 597 aa8.08□□□□□ -1.12
PMPCB-208ENST00000498530 TNPO3Q9Y5L0 923 aaKnown RBP8.08□□□□□ -1.12
PMPCB-208ENST00000498530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.07□□□□□ -1.12
PMPCB-208ENST00000498530 E2F8A0AVK6 867 aa8.07□□□□□ -1.12
PMPCB-208ENST00000498530 KATNA1O75449 491 aa8.07□□□□□ -1.12
PMPCB-208ENST00000498530 EIF3JO75822 258 aaKnown RBP8.07□□□□□ -1.12
PMPCB-208ENST00000498530 GFRA1P56159 465 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms