RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 FAM129CQ86XR2 697 aa4.6□□□□□ -1.67
SGMS1-205ENST00000498514 LINC01356Q8N9X3 169 aa4.6□□□□□ -1.67
SGMS1-205ENST00000498514 ENOX1Q8TC92 643 aaKnown RBP4.6□□□□□ -1.67
SGMS1-205ENST00000498514 JARID2Q92833 1246 aaPredicted RBP4.6□□□□□ -1.67
SGMS1-205ENST00000498514 MAP6Q96JE9 813 aa4.6□□□□□ -1.67
SGMS1-205ENST00000498514 KREMEN1Q96MU8 473 aa4.6□□□□□ -1.67
SGMS1-205ENST00000498514 ASPNQ9BXN1 380 aa4.6□□□□□ -1.67
SGMS1-205ENST00000498514 ASCC2Q9H1I8 757 aaPredicted RBP4.6□□□□□ -1.67
SGMS1-205ENST00000498514 CORINQ9Y5Q5 1042 aa4.6□□□□□ -1.67
SGMS1-205ENST00000498514 CILPO75339 1184 aa4.59□□□□□ -1.67
SGMS1-205ENST00000498514 INSRRP14616 1297 aa4.59□□□□□ -1.67
SGMS1-205ENST00000498514 SDHBP21912 280 aa4.59□□□□□ -1.67
SGMS1-205ENST00000498514 LIG3P49916 1009 aa4.59□□□□□ -1.67
SGMS1-205ENST00000498514 TMEM201Q5SNT2 666 aa4.59□□□□□ -1.67
SGMS1-205ENST00000498514 CEP128Q6ZU80 1094 aa4.59□□□□□ -1.67
SGMS1-205ENST00000498514 SLFN12Q8IYM2 578 aa4.59□□□□□ -1.67
SGMS1-205ENST00000498514 PWWP2AQ96N64 755 aa4.59□□□□□ -1.67
SGMS1-205ENST00000498514 BDH2Q9BUT1 245 aa4.59□□□□□ -1.67
SGMS1-205ENST00000498514 GNEQ9Y223 722 aaKnown RBP4.59□□□□□ -1.67
SGMS1-205ENST00000498514 MPOP05164 745 aa4.58□□□□□ -1.68
SGMS1-205ENST00000498514 TFE3P19532 575 aaPredicted RBP4.58□□□□□ -1.68
SGMS1-205ENST00000498514 EIF4BP23588 611 aaKnown RBP4.58□□□□□ -1.68
SGMS1-205ENST00000498514 ERVFRD-1P60508 538 aa4.58□□□□□ -1.68
SGMS1-205ENST00000498514 PUM1Q14671 1186 aaKnown RBP eCLIP4.58□□□□□ -1.685e-6■□□□□ 10.2
SGMS1-205ENST00000498514 LDHDQ86WU2 507 aa4.58□□□□□ -1.68
SGMS1-205ENST00000498514 USHBP1Q8N6Y0 703 aa4.58□□□□□ -1.68
SGMS1-205ENST00000498514 GPR20Q99678 358 aa4.58□□□□□ -1.68
SGMS1-205ENST00000498514 MYRFQ9Y2G1 1151 aa4.58□□□□□ -1.68
SGMS1-205ENST00000498514 SSU72P8A0A1W2PR75 194 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 RTP1P59025 263 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 CHMP4BP1P59074 171 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 TMEM62Q0P6H9 643 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 IGDCC3Q8IVU1 814 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 DAGLBQ8NCG7 672 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 SYTL5Q8TDW5 730 aaPredicted RBP4.57□□□□□ -1.68
SGMS1-205ENST00000498514 HHIPL1Q96JK4 782 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 CCDC74BQ96LY2 380 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 ASB16Q96NS5 453 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 FOXP3Q9BZS1 431 aa4.57□□□□□ -1.68
SGMS1-205ENST00000498514 LDHBP07195 334 aaKnown RBP4.56□□□□□ -1.68
SGMS1-205ENST00000498514 RLBP1P12271 317 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 ARL4AP40617 200 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 KCNC1P48547 511 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 PCBP3P57721 371 aaKnown RBP4.56□□□□□ -1.68
SGMS1-205ENST00000498514 NMIQ13287 307 aaPredicted RBP4.56□□□□□ -1.68
SGMS1-205ENST00000498514 RTP5Q14D33 572 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 TMC6Q7Z403 805 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 CCDC84Q86UT8 332 aaPredicted RBP4.56□□□□□ -1.68
SGMS1-205ENST00000498514 TP53I13Q8NBR0 393 aaPredicted RBP4.56□□□□□ -1.68
SGMS1-205ENST00000498514 RETREG2Q8NC44 543 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 TCTN2Q96GX1 697 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 HDAC8Q9BY41 377 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 KLHL14Q9P2G3 628 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 TCFL5Q9UL49 500 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 PALD1Q9ULE6 856 aa4.56□□□□□ -1.68
SGMS1-205ENST00000498514 TMEM82A0PJX8 343 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 CHURC1-FNTBB4DL54 471 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 PRICKLE3O43900 615 aaPredicted RBP4.55□□□□□ -1.68
SGMS1-205ENST00000498514 BPNT1O95861 308 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 GNA15P30679 374 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 GALNT18Q6P9A2 607 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 HHIPL2Q6UWX4 724 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 PLCD4Q9BRC7 762 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 REV1Q9UBZ9 1251 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 KLHL3Q9UH77 587 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 CNOT11Q9UKZ1 510 aaKnown RBP4.55□□□□□ -1.68
SGMS1-205ENST00000498514 TLR6Q9Y2C9 796 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 PCDHA5Q9Y5H7 936 aa4.55□□□□□ -1.68
SGMS1-205ENST00000498514 WTIPA6NIX2 430 aaPredicted RBP4.54□□□□□ -1.68
SGMS1-205ENST00000498514 K7ESM1 405 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 FKTNO75072 461 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 P4HBP07237 508 aaKnown RBP4.54□□□□□ -1.68
SGMS1-205ENST00000498514 GBP1P32455 592 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 CAP1Q01518 475 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 LAPTM5Q13571 262 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 RAB3GAP1Q15042 981 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 ZFYVE27Q5T4F4 411 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 PHACTR4Q8IZ21 702 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 NLGN1Q8N2Q7 840 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 ZNF655Q8N720 491 aaPredicted RBP4.54□□□□□ -1.68
SGMS1-205ENST00000498514 LINC00116Q8NCU8 138 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 VWCEQ96DN2 955 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 KIF2CQ99661 725 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 TNFRSF10DQ9UBN6 386 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 TAF6LQ9Y6J9 622 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 AK5Q9Y6K8 562 aa4.54□□□□□ -1.68
SGMS1-205ENST00000498514 PRR36Q9H6K5 1346 aa4.53□□□□□ -1.68
SGMS1-205ENST00000498514 FFAR3O14843 346 aa4.53□□□□□ -1.68
SGMS1-205ENST00000498514 BUB1BO60566 1050 aaPredicted RBP4.53□□□□□ -1.68
SGMS1-205ENST00000498514 SYPP08247 313 aa4.53□□□□□ -1.68
SGMS1-205ENST00000498514 SLURP1P55000 103 aa4.53□□□□□ -1.68
SGMS1-205ENST00000498514 NCKAP1LP55160 1127 aa4.53□□□□□ -1.68
SGMS1-205ENST00000498514 RNF4P78317 190 aa4.53□□□□□ -1.68
SGMS1-205ENST00000498514 UBXN11Q5T124 520 aa4.53□□□□□ -1.68
SGMS1-205ENST00000498514 ZPBP2Q6X784 338 aa4.53□□□□□ -1.68
SGMS1-205ENST00000498514 FADS2P1A8MWK0 482 aa4.52□□□□□ -1.69
SGMS1-205ENST00000498514 PRKCAP17252 672 aa4.52□□□□□ -1.69
SGMS1-205ENST00000498514 CYP4F8P98187 520 aa4.52□□□□□ -1.69
SGMS1-205ENST00000498514 CBX2Q14781 532 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms