RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 BTN2A2Q8WVV5 523 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 CHMP4CQ96CF2 233 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 HOOK2Q96ED9 719 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 SCLYQ96I15 445 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 TRIM47Q96LD4 638 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 RTFDC1Q9BY42 306 aaPredicted RBP10.85□□□□□ -0.67
SNX13-212ENST00000498463 TRIM8Q9BZR9 551 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 MKRN2Q9H000 416 aaKnown RBP10.85□□□□□ -0.67
SNX13-212ENST00000498463 RAD18Q9NS91 495 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 EMC9Q9Y3B6 208 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 E2F8A0AVK6 867 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 BLACEA4D250 179 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 DDX3YO15523 660 aaKnown RBP10.84□□□□□ -0.67
SNX13-212ENST00000498463 JMJD7P0C870 316 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 TMPRSS15P98073 1019 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 SETDB1Q15047 1291 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 PRAMEF13Q5VWM6 474 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 ZBTB46Q86UZ6 589 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 RNF214Q8ND24 703 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 TTC8Q8TAM2 541 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 NANOS1Q8WY41 292 aaKnown RBP10.84□□□□□ -0.67
SNX13-212ENST00000498463 TTC1Q99614 292 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 PPP1R9AQ9ULJ8 1098 aa10.84□□□□□ -0.67
SNX13-212ENST00000498463 SHOXO15266 292 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 CREB3O43889 395 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 MYL1P05976 194 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 MAP2K3P46734 347 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 HDAC1Q13547 482 aaPredicted RBP10.83□□□□□ -0.68
SNX13-212ENST00000498463 HLTFQ14527 1009 aaKnown RBP eCLIP10.83□□□□□ -0.68
SNX13-212ENST00000498463 ANKRD39Q53RE8 183 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 ADCY4Q8NFM4 1077 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 COG1Q8WTW3 980 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 USP7Q93009 1102 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 TRHDEQ9UKU6 1024 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 AKT3Q9Y243 479 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 COMMD10Q9Y6G5 202 aa10.83□□□□□ -0.68
SNX13-212ENST00000498463 LILRB5O75023 590 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 CD247P20963 164 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 SLBPQ14493 270 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNX13-212ENST00000498463 CFAP100Q494V2 611 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 POMZP3Q6PJE2 187 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 TSHZ1Q6ZSZ6 1077 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 UBE3DQ7Z6J8 389 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 PASD1Q8IV76 773 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 FAM9AQ8IZU1 332 aaPredicted RBP10.82□□□□□ -0.68
SNX13-212ENST00000498463 CRACR2BQ8N4Y2 399 aaPredicted RBP10.82□□□□□ -0.68
SNX13-212ENST00000498463 CNTD1Q8N815 330 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 PTPRN2Q92932 1015 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 RCC1LQ96I51 464 aaKnown RBP10.82□□□□□ -0.68
SNX13-212ENST00000498463 DISC1Q9NRI5 854 aa10.82□□□□□ -0.68
SNX13-212ENST00000498463 NSFL1CQ9UNZ2 370 aaKnown RBP10.82□□□□□ -0.68
SNX13-212ENST00000498463 NRG2O14511 850 aaPredicted RBP10.81□□□□□ -0.68
SNX13-212ENST00000498463 NEMP1O14524 444 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 GABRDO14764 452 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 BPIP17213 487 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 FLT3P36888 993 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 CAP2P40123 477 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 MSL1Q68DK7 614 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 NXNQ6DKJ4 435 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 TMED8Q6PL24 325 aaPredicted RBP10.81□□□□□ -0.68
SNX13-212ENST00000498463 SLCO4C1Q6ZQN7 724 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 PI4K2BQ8TCG2 481 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 SLC39A13Q96H72 371 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 FANCD2OSQ96PS1 177 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 IFT22Q9H7X7 185 aa10.81□□□□□ -0.68
SNX13-212ENST00000498463 CGGBP1Q9UFW8 167 aaPredicted RBP10.81□□□□□ -0.68
SNX13-212ENST00000498463 TCRBV16S1A1N1A0A5B0 115 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 APBA3O96018 575 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 CST3P01034 146 aaPredicted RBP10.8□□□□□ -0.68
SNX13-212ENST00000498463 NEFMP07197 916 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 ITGA4P13612 1032 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 SF1Q15637 639 aaKnown RBP10.8□□□□□ -0.68
SNX13-212ENST00000498463 NTRK3Q16288 839 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 FOXD4L6Q3SYB3 417 aaPredicted RBP10.8□□□□□ -0.68
SNX13-212ENST00000498463 SYCP2LQ5T4T6 812 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 FAM102BQ5T8I3 360 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 SYDE2Q5VT97 1194 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 FOXD4L3Q6VB84 417 aaPredicted RBP10.8□□□□□ -0.68
SNX13-212ENST00000498463 CDC37L1Q7L3B6 337 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 MAP4K3Q8IVH8 894 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 TCEAL8Q8IYN2 117 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 C7orf61Q8IZ16 206 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 ARHGEF39Q8N4T4 335 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 KCT2Q8NC54 265 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 OR2W6PQ8NHA6 318 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 KCTD13Q8WZ19 329 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 MAGEB10Q96LZ2 347 aaPredicted RBP10.8□□□□□ -0.68
SNX13-212ENST00000498463 CAMKK2Q96RR4 588 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 MPHOSPH6Q99547 160 aaKnown RBP10.8□□□□□ -0.68
SNX13-212ENST00000498463 GP6Q9HCN6 339 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 ZNF180Q9UJW8 692 aa10.8□□□□□ -0.68
SNX13-212ENST00000498463 NOB1Q9ULX3 412 aaKnown RBP10.8□□□□□ -0.68
SNX13-212ENST00000498463 CD68P34810 354 aaPredicted RBP10.79□□□□□ -0.68
SNX13-212ENST00000498463 ID4P47928 161 aa10.79□□□□□ -0.68
SNX13-212ENST00000498463 GFRA1P56159 465 aa10.79□□□□□ -0.68
SNX13-212ENST00000498463 MAP4K2Q12851 820 aa10.79□□□□□ -0.68
SNX13-212ENST00000498463 AUHQ13825 339 aaKnown RBP10.79□□□□□ -0.68
SNX13-212ENST00000498463 NBPF12Q5TAG4 269 aaPredicted RBP10.79□□□□□ -0.68
SNX13-212ENST00000498463 PPP4R4Q6NUP7 873 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms