RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 PROCA1Q8NCQ7 364 aaPredicted RBP13.38□□□□□ -0.27
CTTN-208ENST00000498223 LPAR1Q92633 364 aa13.38□□□□□ -0.27
CTTN-208ENST00000498223 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
CTTN-208ENST00000498223 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
CTTN-208ENST00000498223 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
CTTN-208ENST00000498223 INHBEP58166 350 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 RAB11FIP4Q86YS3 637 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 GMCL1P1Q8NEA9 526 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 DCAF4Q8WV16 495 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 BRI3BPQ8WY22 251 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 IL17RAQ96F46 866 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 MS4A4AQ96JQ5 239 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 NUP88Q99567 741 aaPredicted RBP13.37□□□□□ -0.27
CTTN-208ENST00000498223 KIF2CQ99661 725 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 MYL10Q9BUA6 226 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 RPAP3Q9H6T3 665 aaPredicted RBP13.37□□□□□ -0.27
CTTN-208ENST00000498223 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
CTTN-208ENST00000498223 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
CTTN-208ENST00000498223 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 WDR46O15213 610 aaKnown RBP13.36□□□□□ -0.27
CTTN-208ENST00000498223 ZBTB43O43298 467 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 DDAH1O94760 285 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 PARP1P09874 1014 aaKnown RBP13.36□□□□□ -0.27
CTTN-208ENST00000498223 CALM1P0DP23 149 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 CALM2P0DP24 149 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 CALM3P0DP25 149 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 BMP3P12645 472 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 VCAM1P19320 739 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 OSBPP22059 807 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 NOVP48745 357 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 AK2P54819 239 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 IRX3P78415 501 aaPredicted RBP13.36□□□□□ -0.27
CTTN-208ENST00000498223 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 TOB2Q14106 344 aaPredicted RBP13.36□□□□□ -0.27
CTTN-208ENST00000498223 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 KCTD1Q719H9 257 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 MICU3Q86XE3 530 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 CCDC144CPQ8IYA2 1237 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 CTCFLQ8NI51 663 aaPredicted RBP13.36□□□□□ -0.27
CTTN-208ENST00000498223 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 AGTPBP1Q9UPW5 1226 aa13.36□□□□□ -0.27
CTTN-208ENST00000498223 CTDP1Q9Y5B0 961 aaPredicted RBP13.36□□□□□ -0.27
CTTN-208ENST00000498223 GOLGA8AA7E2F4 631 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 GOLGA8BA8MQT2 603 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 BTBD19C9JJ37 291 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 DHX16O60231 1041 aaKnown RBP13.35□□□□□ -0.27
CTTN-208ENST00000498223 FLOT1O75955 427 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 GOLGA8HP0CJ92 632 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 PDHBP11177 359 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 RXRAP19793 462 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 KIF5BP33176 963 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 TM4SF4P48230 202 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 STK3Q13188 491 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 TREML2Q5T2D2 321 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 APOA5Q6Q788 366 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 RASGRP2Q7LDG7 609 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 ANKRD23Q86SG2 305 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 SGMS1Q86VZ5 419 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 BRPF3Q9ULD4 1205 aa13.35□□□□□ -0.27
CTTN-208ENST00000498223 TESPA1A2RU30 521 aaPredicted RBP13.34□□□□□ -0.27
CTTN-208ENST00000498223 TMEM232C9JQI7 657 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 PDHXO00330 501 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 RGS19P49795 217 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
CTTN-208ENST00000498223 ZNF543Q08ER8 600 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 RTN1Q16799 776 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 ASPRV1Q53RT3 343 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 GPAT2Q6NUI2 795 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 CHURC1Q8WUH1 139 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 GMCL1Q96IK5 515 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 AGXT2Q9BYV1 514 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 ALDH8A1Q9H2A2 487 aaPredicted RBP13.34□□□□□ -0.27
CTTN-208ENST00000498223 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
CTTN-208ENST00000498223 FEM1BQ9UK73 627 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 RLFQ13129 1914 aa13.34□□□□□ -0.27
CTTN-208ENST00000498223 STAT2P52630 851 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 CCT2P78371 535 aaKnown RBP13.33□□□□□ -0.28
CTTN-208ENST00000498223 MOGSQ13724 837 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 GRM4Q14833 912 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 TAF1CQ15572 869 aaPredicted RBP13.33□□□□□ -0.28
CTTN-208ENST00000498223 NOM1Q5C9Z4 860 aaKnown RBP13.33□□□□□ -0.28
CTTN-208ENST00000498223 GPATCH4Q5T3I0 446 aaKnown RBP13.33□□□□□ -0.28
CTTN-208ENST00000498223 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 CTU1Q7Z7A3 348 aaKnown RBP13.33□□□□□ -0.28
CTTN-208ENST00000498223 FAM160B2Q86V87 743 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 FAM43AQ8N2R8 423 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 FANCBQ8NB91 859 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 IL27Q8NEV9 243 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 SMCR8Q8TEV9 937 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms