RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CTU1Q7Z7A3 348 aaKnown RBP13.34□□□□□ -0.27
ERCC8-208ENST00000497892 TNS4Q8IZW8 715 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 ZNF444Q8N0Y2 327 aaPredicted RBP13.34□□□□□ -0.27
ERCC8-208ENST00000497892 ERO1AQ96HE7 468 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 NBPF3Q9H094 633 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 ASCC2Q9H1I8 757 aaPredicted RBP13.34□□□□□ -0.27
ERCC8-208ENST00000497892 CPA4Q9UI42 421 aa13.34□□□□□ -0.27
ERCC8-208ENST00000497892 RLFQ13129 1914 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 TSPY3P0CV98 308 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 TSPY8P0CW00 308 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 PCP11498 1178 aaKnown RBP13.33□□□□□ -0.28
ERCC8-208ENST00000497892 OSBPP22059 807 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 HAND2P61296 217 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 IRX3P78415 501 aaPredicted RBP13.33□□□□□ -0.28
ERCC8-208ENST00000497892 LACTBP83111 547 aaPredicted RBP13.33□□□□□ -0.28
ERCC8-208ENST00000497892 TBC1D10CQ8IV04 446 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 NEDD1Q8NHV4 660 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 CD99L2Q8TCZ2 262 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 LPAR1Q92633 364 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 TACC3Q9Y6A5 838 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 HTTP42858 3142 aa13.33□□□□□ -0.28
ERCC8-208ENST00000497892 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
ERCC8-208ENST00000497892 CAP1Q01518 475 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 TFAP4Q01664 338 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 STAG1Q8WVM7 1258 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 CEP95Q96GE4 821 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 VCPKMTQ9H867 229 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 INCENPQ9NQS7 918 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 MTMR4Q9NYA4 1195 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 NYAP2Q9P242 653 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 CTNNA3Q9UI47 895 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 SYNPO2Q9UMS6 1093 aa13.32□□□□□ -0.28
ERCC8-208ENST00000497892 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 USP17L15C9J2P7 530 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 USP17L13C9JLJ4 530 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 USP17L11C9JVI0 530 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 USP17L18D6R9N7 530 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 USP17L22D6RA61 530 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 USP17L17D6RBQ6 530 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 USP17L19D6RCP7 530 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 USP17L20D6RJB6 530 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 ZNF213O14771 459 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 HERVK_113P62684 666 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 ATP2B2Q01814 1243 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 USP17L24Q0WX57 530 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 FAM110CQ1W6H9 321 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 KIAA1755Q5JYT7 1200 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 AKNAD1Q5T1N1 836 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 POTEEQ6S8J3 1075 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 OTOP1Q7RTM1 612 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 MCOLN1Q9GZU1 580 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 CRISPLD2Q9H0B8 497 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 RNF41Q9H4P4 317 aaPredicted RBP13.31□□□□□ -0.28
ERCC8-208ENST00000497892 RPAP3Q9H6T3 665 aaPredicted RBP13.31□□□□□ -0.28
ERCC8-208ENST00000497892 GOPCQ9HD26 462 aa13.31□□□□□ -0.28
ERCC8-208ENST00000497892 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
ERCC8-208ENST00000497892 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
ERCC8-208ENST00000497892 TTLL1O95922 423 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 NT5C2P49902 561 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 PTH1RQ03431 593 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 PKN2Q16513 984 aaKnown RBP13.3□□□□□ -0.28
ERCC8-208ENST00000497892 IMMTQ16891 758 aaKnown RBP13.3□□□□□ -0.28
ERCC8-208ENST00000497892 CATSPERGQ6ZRH7 1159 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 MFSD6Q6ZSS7 791 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 SPICE1Q8N0Z3 855 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 ANKRD13CQ8N6S4 541 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 P2RX7Q99572 595 aaKnown RBP13.3□□□□□ -0.28
ERCC8-208ENST00000497892 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 ARHGAP39Q9C0H5 1083 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 TOMM22Q9NS69 142 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 MORF4L1Q9UBU8 362 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 TRIM17Q9Y577 477 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 NEDD4P46934 1319 aa13.3□□□□□ -0.28
ERCC8-208ENST00000497892 GTPBP6O43824 516 aaPredicted RBP13.29□□□□□ -0.28
ERCC8-208ENST00000497892 CDC45O75419 566 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 CTGFP29279 349 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 NOVP48745 357 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 KIF22Q14807 665 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 ARHGEF6Q15052 776 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 RRP12Q5JTH9 1297 aaKnown RBP13.29□□□□□ -0.28
ERCC8-208ENST00000497892 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 LBX2Q6XYB7 198 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 GTF3C2Q8WUA4 911 aaPredicted RBP13.29□□□□□ -0.28
ERCC8-208ENST00000497892 MKL1Q969V6 931 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 TRIM47Q96LD4 638 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 TANGO6Q9C0B7 1094 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 EFCC1Q9HA90 598 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 IL17RBQ9NRM6 502 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 CLIP2Q9UDT6 1046 aa13.29□□□□□ -0.28
ERCC8-208ENST00000497892 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
ERCC8-208ENST00000497892 NMT2O60551 498 aa13.28□□□□□ -0.28
ERCC8-208ENST00000497892 NDUFB10O96000 172 aa13.28□□□□□ -0.28
ERCC8-208ENST00000497892 GNRH1P01148 92 aa13.28□□□□□ -0.28
ERCC8-208ENST00000497892 FBXO46Q6PJ61 603 aaPredicted RBP13.28□□□□□ -0.28
ERCC8-208ENST00000497892 LRRC47Q8N1G4 583 aaKnown RBP13.28□□□□□ -0.28
ERCC8-208ENST00000497892 GMCL1P1Q8NEA9 526 aa13.28□□□□□ -0.28
ERCC8-208ENST00000497892 ESR2Q92731 530 aa13.28□□□□□ -0.28
ERCC8-208ENST00000497892 MAP4K1Q92918 833 aa13.28□□□□□ -0.28
ERCC8-208ENST00000497892 TXNRD2Q9NNW7 524 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms