RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CDC27P30260 824 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 TMEM179Q6ZVK1 233 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 IFNL1Q8IU54 200 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 PNMA1Q8ND90 353 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 RGS22Q8NE09 1264 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 TMEM47Q9BQJ4 181 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 MYL10Q9BUA6 226 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 KIF3AQ9Y496 699 aa16.52■□□□□ 0.24
VPS26A-209ENST00000497564 STK36Q9NRP7 1315 aa16.51■□□□□ 0.23
VPS26A-209ENST00000497564 PHF20L1A8MW92 1017 aa16.51■□□□□ 0.23
VPS26A-209ENST00000497564 TTLL1O95922 423 aa16.51■□□□□ 0.23
VPS26A-209ENST00000497564 IFNAR1P17181 557 aa16.51■□□□□ 0.23
VPS26A-209ENST00000497564 RXRAP19793 462 aa16.51■□□□□ 0.23
VPS26A-209ENST00000497564 ADD1P35611 737 aaKnown RBP16.51■□□□□ 0.23
VPS26A-209ENST00000497564 RAB11FIP4Q86YS3 637 aa16.51■□□□□ 0.23
VPS26A-209ENST00000497564 BRI3BPQ8WY22 251 aa16.51■□□□□ 0.23
VPS26A-209ENST00000497564 HOOK2Q96ED9 719 aa16.51■□□□□ 0.23
VPS26A-209ENST00000497564 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.51■□□□□ 0.23
VPS26A-209ENST00000497564 STX8Q9UNK0 236 aa16.51■□□□□ 0.23
VPS26A-209ENST00000497564 IRF6O14896 467 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 BRD1O95696 1058 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 SYT1P21579 422 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 ABCB5Q2M3G0 1257 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 ERO1BQ86YB8 467 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 NUP133Q8WUM0 1156 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 MKL1Q969V6 931 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 KANSL2Q9H9L4 492 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 GINM1Q9NU53 330 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 NYAP2Q9P242 653 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 SYNPO2Q9UMS6 1093 aa16.5■□□□□ 0.23
VPS26A-209ENST00000497564 TESPA1A2RU30 521 aaPredicted RBP16.49■□□□□ 0.23
VPS26A-209ENST00000497564 MPHOSPH10O00566 681 aaKnown RBP16.49■□□□□ 0.23
VPS26A-209ENST00000497564 STX6O43752 255 aa16.49■□□□□ 0.23
VPS26A-209ENST00000497564 FDPSP14324 419 aaKnown RBP16.49■□□□□ 0.23
VPS26A-209ENST00000497564 KIF5BP33176 963 aa16.49■□□□□ 0.23
VPS26A-209ENST00000497564 GUCY1A2P33402 732 aa16.49■□□□□ 0.23
VPS26A-209ENST00000497564 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
VPS26A-209ENST00000497564 GRM4Q14833 912 aa16.49■□□□□ 0.23
VPS26A-209ENST00000497564 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
VPS26A-209ENST00000497564 CTCFLQ8NI51 663 aaPredicted RBP16.49■□□□□ 0.23
VPS26A-209ENST00000497564 CABP5Q9NP86 173 aa16.49■□□□□ 0.23
VPS26A-209ENST00000497564 ZDHHC9Q9Y397 364 aa16.49■□□□□ 0.23
VPS26A-209ENST00000497564 CENPFP49454 3210 aa16.49■□□□□ 0.23
VPS26A-209ENST00000497564 CCL15-CCL14A0A0B4J2E2 113 aa16.48■□□□□ 0.23
VPS26A-209ENST00000497564 FMNL1O95466 1100 aaPredicted RBP16.48■□□□□ 0.23
VPS26A-209ENST00000497564 INHBEP58166 350 aa16.48■□□□□ 0.23
VPS26A-209ENST00000497564 PPIL2Q13356 520 aa16.48■□□□□ 0.23
VPS26A-209ENST00000497564 CCL15Q16663 113 aa16.48■□□□□ 0.23
VPS26A-209ENST00000497564 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
VPS26A-209ENST00000497564 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
VPS26A-209ENST00000497564 CCDC84Q86UT8 332 aaPredicted RBP16.48■□□□□ 0.23
VPS26A-209ENST00000497564 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
VPS26A-209ENST00000497564 ZNF296Q8WUU4 475 aaPredicted RBP16.48■□□□□ 0.23
VPS26A-209ENST00000497564 PTPRFP10586 1907 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 GPR25O00155 361 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 GDF11O95390 407 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 CAP2P40123 477 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 GNAQP50148 359 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 FUT2Q10981 343 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 CRHR2Q13324 411 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 PKP1Q13835 747 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 SEPT2Q15019 361 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 NOL9Q5SY16 702 aaKnown RBP16.47■□□□□ 0.23
VPS26A-209ENST00000497564 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 DDX11Q96FC9 970 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 CFHR5Q9BXR6 569 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 RNF26Q9BY78 433 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-209ENST00000497564 MCOLN1Q9GZU1 580 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
VPS26A-209ENST00000497564 ZBTB21Q9ULJ3 1066 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 MTMR6Q9Y217 621 aa16.47■□□□□ 0.23
VPS26A-209ENST00000497564 PALM3A6NDB9 673 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-209ENST00000497564 GH2P01242 217 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 GTF2A2P52657 109 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 JAG1P78504 1218 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 ICA1Q05084 483 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 SSRP1Q08945 709 aaKnown RBP16.46■□□□□ 0.23
VPS26A-209ENST00000497564 DGKZQ13574 1117 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.23
VPS26A-209ENST00000497564 CLEC17AQ6ZS10 378 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 ABHD8Q96I13 439 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 LZTS2Q9BRK4 669 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 CLIP2Q9UDT6 1046 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 PARP14Q460N5 1801 aa16.46■□□□□ 0.23
VPS26A-209ENST00000497564 CNTNAP5Q8WYK1 1306 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 ASNSP08243 561 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
VPS26A-209ENST00000497564 PDHBP11177 359 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 EEF2P13639 858 aaKnown RBP16.45■□□□□ 0.22
VPS26A-209ENST00000497564 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 PPATQ06203 517 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 MOGSQ13724 837 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 CLEC10AQ8IUN9 316 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 SCYL3Q8IZE3 742 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 WASF1Q92558 559 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms