RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SFSWAPQ12872 951 aaKnown RBP3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 UBE4AQ14139 1066 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 MAP3K11Q16584 847 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 ZNF423Q2M1K9 1284 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 SLC10A6Q3KNW5 377 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 EFHC2Q5JST6 749 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 PERM1Q5SV97 790 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 DIEXFQ68CQ4 756 aaKnown RBP3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 NXNQ6DKJ4 435 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 LLGL2Q6P1M3 1020 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 ADAMTSL4Q6UY14 1074 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 TRIM67Q6ZTA4 783 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 DHX32Q7L7V1 743 aaKnown RBP3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 VN1R5Q7Z5H4 357 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 DDX42Q86XP3 938 aaKnown RBP eCLIP3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 JAMLQ86YT9 394 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 KLHL6Q8WZ60 621 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 CEP89Q96ST8 783 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 PSMD1Q99460 953 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 RUSC1Q9BVN2 902 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 CNNM2Q9H8M5 875 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 POLMQ9NP87 494 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 AVENQ9NQS1 362 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 GMIPQ9P107 970 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 MCM8Q9UJA3 840 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 ADAM30Q9UKF2 790 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 PRR12Q9ULL5 1215 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 SNCAIPQ9Y6H5 919 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 KCPQ6ZWJ8 1503 aa3.29□□□□□ -1.88
CKS1BP2-201ENST00000497342 PLEKHH2Q8IVE3 1493 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 ZFYVE9O95405 1425 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 MTUS2Q5JR59 1369 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 KIF15Q9NS87 1388 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 CENPFP49454 3210 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 LTBP3Q9NS15 1303 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 LOC102724428A0A0B4J2F2 783 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 E2F8A0AVK6 867 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 TTLL8A6PVC2 850 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 METTL12A8MUP2 240 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 ZBTB42B2RXF5 422 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 ATXN7O15265 892 aaPredicted RBP3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 SUSD5O60279 629 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 UPP2O95045 317 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 MAPTP10636 758 aaKnown RBP3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 SIK1P57059 783 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 RHBDL3P58872 404 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 RING1Q06587 406 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 SPEM2Q0P670 501 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 PABPC4Q13310 644 aaKnown RBP eCLIP3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 AP3B2Q13367 1082 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 MAP7Q14244 749 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 DHCR24Q15392 516 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 ZNF827Q17R98 1081 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 C4orf46Q504U0 113 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 MRPL14Q6P1L8 145 aaKnown RBP3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 C6orf15Q6UXA7 325 aaPredicted RBP3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 NCAPG2Q86XI2 1143 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 CCDC146Q8IYE0 955 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 SAMD3Q8N6K7 520 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 STK35Q8TDR2 534 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 HPS1Q92902 700 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 TNFRSF25Q93038 417 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 FAM126AQ9BYI3 521 aaPredicted RBP3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 ASPSCR1Q9BZE9 553 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 MUC3BQ9H195 1237 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 FRRS1LQ9P0K9 344 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 MARK1Q9P0L2 795 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 ZNF214Q9UL59 606 aaPredicted RBP3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 PCDHB14Q9Y5E9 798 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 CASP8AP2Q9UKL3 1982 aa3.28□□□□□ -1.88
CKS1BP2-201ENST00000497342 NCOR1O75376 2440 aa3.28□□□□□ -1.89
CKS1BP2-201ENST00000497342 MUC6Q6W4X9 2439 aa3.28□□□□□ -1.89
CKS1BP2-201ENST00000497342 HFM1A2PYH4 1435 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 ARHGAP31Q2M1Z3 1444 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 RRBP1Q9P2E9 1410 aaKnown RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 FLNBO75369 2602 aaKnown RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 PLEKHG2Q9H7P9 1386 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 EYSQ5T1H1 3165 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 PHRF1Q9P1Y6 1649 aaKnown RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 IGSF1Q8N6C5 1336 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 CHD6Q8TD26 2715 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 TM4SF5O14894 197 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 TLR3O15455 904 aaKnown RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 PDE8AO60658 829 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 ALDH1L1O75891 902 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 HTR3BO95264 441 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 BPNT1O95861 308 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 FGFR1P11362 822 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 ESRRAP11474 423 aaPredicted RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 NME1P15531 152 aaKnown RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 VEGFAP15692 232 aaPredicted RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 NFKB1P19838 968 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 PTPN11Q06124 597 aaPredicted RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 PCDH1Q08174 1060 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 SEPT6Q14141 434 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 TTF1Q15361 905 aaPredicted RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 LONRF3Q496Y0 759 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 GK5Q6ZS86 529 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 CYFIP1Q7L576 1253 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 PRICKLE2Q7Z3G6 844 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms