RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 NT5DC4Q86YG4 428 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 DZIP1LQ8IYY4 767 aaKnown RBP8.49□□□□□ -1.05
MSH5-219ENST00000497269 GOLM1Q8NBJ4 401 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 FBLIM1Q8WUP2 373 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 FAM46AQ96IP4 442 aaKnown RBP8.49□□□□□ -1.05
MSH5-219ENST00000497269 RHOVQ96L33 236 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 SIN3AQ96ST3 1273 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 SUGCTQ9HAC7 445 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 FAM105AQ9NUU6 356 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 ALS2Q96Q42 1657 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 TULP4Q9NRJ4 1543 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 NRAPQ86VF7 1730 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 NWD2Q9ULI1 1742 aa8.49□□□□□ -1.05
MSH5-219ENST00000497269 RNGTTO60942 597 aaKnown RBP8.48□□□□□ -1.05
MSH5-219ENST00000497269 PPM1JQ5JR12 505 aa8.48□□□□□ -1.05
MSH5-219ENST00000497269 WIPI1Q5MNZ9 446 aaPredicted RBP8.48□□□□□ -1.05
MSH5-219ENST00000497269 LRFN4Q6PJG9 635 aa8.48□□□□□ -1.05
MSH5-219ENST00000497269 PLPPR2Q96GM1 343 aa8.48□□□□□ -1.05
MSH5-219ENST00000497269 FANCD2OSQ96PS1 177 aa8.48□□□□□ -1.05
MSH5-219ENST00000497269 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
MSH5-219ENST00000497269 PIDD1Q9HB75 910 aa8.48□□□□□ -1.05
MSH5-219ENST00000497269 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
MSH5-219ENST00000497269 SPATA31A1Q5TZJ5 1347 aa8.48□□□□□ -1.05
MSH5-219ENST00000497269 COL14A1Q05707 1796 aaKnown RBP8.48□□□□□ -1.05
MSH5-219ENST00000497269 ARHGEF28Q8N1W1 1705 aaKnown RBP8.47□□□□□ -1.05
MSH5-219ENST00000497269 F13A1P00488 732 aa8.47□□□□□ -1.05
MSH5-219ENST00000497269 TCF3P15923 654 aa8.47□□□□□ -1.05
MSH5-219ENST00000497269 EIF4A3P38919 411 aaKnown RBP8.47□□□□□ -1.05
MSH5-219ENST00000497269 LMNB2Q03252 620 aa8.47□□□□□ -1.05
MSH5-219ENST00000497269 TTLL4Q14679 1199 aa8.47□□□□□ -1.05
MSH5-219ENST00000497269 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
MSH5-219ENST00000497269 TRIM42Q8IWZ5 723 aa8.47□□□□□ -1.05
MSH5-219ENST00000497269 FBXO27Q8NI29 283 aa8.47□□□□□ -1.05
MSH5-219ENST00000497269 CRIM1Q9NZV1 1036 aa8.47□□□□□ -1.05
MSH5-219ENST00000497269 PCDHGC5Q9Y5F6 944 aa8.47□□□□□ -1.05
MSH5-219ENST00000497269 ADGRB2O60241 1585 aa8.47□□□□□ -1.05
MSH5-219ENST00000497269 RACK1P63244 317 aaKnown RBP8.46□□□□□ -1.06
MSH5-219ENST00000497269 ZC3H12AQ5D1E8 599 aaKnown RBP8.46□□□□□ -1.06
MSH5-219ENST00000497269 FBXL19Q6PCT2 694 aa8.46□□□□□ -1.06
MSH5-219ENST00000497269 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.46□□□□□ -1.06
MSH5-219ENST00000497269 METTL16Q86W50 562 aaKnown RBP8.46□□□□□ -1.06
MSH5-219ENST00000497269 MYRFLQ96LU7 910 aa8.46□□□□□ -1.06
MSH5-219ENST00000497269 SSU72Q9NP77 194 aaKnown RBP8.46□□□□□ -1.06
MSH5-219ENST00000497269 ADAMTS1Q9UHI8 967 aa8.46□□□□□ -1.06
MSH5-219ENST00000497269 HIF3AQ9Y2N7 669 aa8.46□□□□□ -1.06
MSH5-219ENST00000497269 DAGLAQ9Y4D2 1042 aa8.46□□□□□ -1.06
MSH5-219ENST00000497269 EIF3AQ14152 1382 aaKnown RBP8.46□□□□□ -1.06
MSH5-219ENST00000497269 ATP7BP35670 1465 aa8.45□□□□□ -1.06
MSH5-219ENST00000497269 DHX15O43143 795 aaKnown RBP8.45□□□□□ -1.06
MSH5-219ENST00000497269 BPNT1O95861 308 aa8.45□□□□□ -1.06
MSH5-219ENST00000497269 FURINP09958 794 aa8.45□□□□□ -1.06
MSH5-219ENST00000497269 MAP4P27816 1152 aaKnown RBP8.45□□□□□ -1.06
MSH5-219ENST00000497269 NFKBIBQ15653 356 aa8.45□□□□□ -1.06
MSH5-219ENST00000497269 ZNF296Q8WUU4 475 aaPredicted RBP8.45□□□□□ -1.06
MSH5-219ENST00000497269 ATXN3LQ9H3M9 355 aa8.45□□□□□ -1.06
MSH5-219ENST00000497269 DISC1Q9NRI5 854 aa8.45□□□□□ -1.06
MSH5-219ENST00000497269 CACNA2D2Q9NY47 1150 aa8.45□□□□□ -1.06
MSH5-219ENST00000497269 CRYBG1Q9Y4K1 1723 aa8.45□□□□□ -1.06
MSH5-219ENST00000497269 GCP02774 474 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 NFICP08651 508 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 ERCC5P28715 1186 aaPredicted RBP8.44□□□□□ -1.06
MSH5-219ENST00000497269 UVSSAQ2YD98 709 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 BEND4Q6ZU67 534 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 PTF1AQ7RTS3 328 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 HDXQ7Z353 690 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 FAM20CQ8IXL6 584 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 CAMKK2Q96RR4 588 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 SPON2Q9BUD6 331 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 PPIP5K1Q6PFW1 1433 aa8.44□□□□□ -1.06
MSH5-219ENST00000497269 PHRF1Q9P1Y6 1649 aaKnown RBP8.43□□□□□ -1.06
MSH5-219ENST00000497269 CAMTA1Q9Y6Y1 1673 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 HMX2A2RU54 273 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 GRIN3BO60391 1043 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 NEFMP07197 916 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 GARTP22102 1010 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 FAM196AQ6ZSG2 479 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 KIAA0825Q8IV33 1275 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 TCP11L2Q8N4U5 519 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 UBP1Q9NZI7 540 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
MSH5-219ENST00000497269 CENPJQ9HC77 1338 aaPredicted RBP8.43□□□□□ -1.06
MSH5-219ENST00000497269 ITSN1Q15811 1721 aa8.43□□□□□ -1.06
MSH5-219ENST00000497269 ETF1P62495 437 aaKnown RBP8.42□□□□□ -1.06
MSH5-219ENST00000497269 RPL6Q02878 288 aaKnown RBP8.42□□□□□ -1.06
MSH5-219ENST00000497269 PRR23CQ6ZRP0 262 aa8.42□□□□□ -1.06
MSH5-219ENST00000497269 UBE3DQ7Z6J8 389 aa8.42□□□□□ -1.06
MSH5-219ENST00000497269 GATAD2BQ8WXI9 593 aa8.42□□□□□ -1.06
MSH5-219ENST00000497269 YIPF2Q9BWQ6 316 aa8.42□□□□□ -1.06
MSH5-219ENST00000497269 ACBD3Q9H3P7 528 aa8.42□□□□□ -1.06
MSH5-219ENST00000497269 STOML1Q9UBI4 398 aa8.42□□□□□ -1.06
MSH5-219ENST00000497269 DDX41Q9UJV9 622 aaKnown RBP8.42□□□□□ -1.06
MSH5-219ENST00000497269 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.42□□□□□ -1.06
MSH5-219ENST00000497269 RAXQ9Y2V3 346 aa8.42□□□□□ -1.06
MSH5-219ENST00000497269 SSH2Q76I76 1423 aa8.42□□□□□ -1.06
MSH5-219ENST00000497269 RGPD1P0DJD0 1748 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 THSD7AQ9UPZ6 1657 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 POLR3AO14802 1390 aaPredicted RBP8.41□□□□□ -1.06
MSH5-219ENST00000497269 FAM95CA0A1B0GW59 222 aa8.41□□□□□ -1.06
MSH5-219ENST00000497269 DYNC1LI2O43237 492 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms