RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 MGRN1O60291 552 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 IPO7O95373 1038 aaKnown RBP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 GHRP10912 638 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 IDEP14735 1019 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 GBP2P32456 591 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 GCKRQ14397 625 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 MEA1Q16626 185 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 SPECC1Q5M775 1068 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 AP1ARQ63HQ0 302 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 CRELD2Q6UXH1 353 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 FAM228AQ86W67 206 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 TSEN2Q8NCE0 465 aaKnown RBP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 TRIM10Q9UDY6 481 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 TPX2Q9ULW0 747 aaKnown RBP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 ANGEL1Q9UNK9 670 aaKnown RBP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 TBC1D2BQ9UPU7 963 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 NDUFB9Q9Y6M9 179 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 FER1L4A9Z1Z3 1794 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 DNAJC8O75937 253 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 IGKV5-2P06315 115 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 ZFYP08048 801 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 TTF1Q15361 905 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 SAFBQ15424 915 aaKnown RBP eCLIP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 CFAP58Q5T655 872 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 TRIM58Q8NG06 486 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 SLC24A3Q9HC58 644 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 RWDD2AQ9UIY3 292 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 LUC7L2Q9Y383 392 aaKnown RBP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 TMEM94Q12767 1356 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 HDLBPQ00341 1268 aaKnown RBP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 PROSER3Q2NL68 480 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 CREG2Q8IUH2 290 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 CCDC155Q8N6L0 562 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 CYFIP2Q96F07 1278 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 ATP6V1G3Q96LB4 118 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 CHP1Q99653 195 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 FOXP1Q9H334 677 aaPredicted RBP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 CAPN11Q9UMQ6 739 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 PES1O00541 588 aaKnown RBP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 TCP1P17987 556 aaKnown RBP14.5□□□□□ -0.09
VEGFA-215ENST00000497139 NAA25Q14CX7 972 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 ANKRD20A8PQ5CZ79 823 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 CCHCR1Q8TD31 782 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.5□□□□□ -0.093e-7■■■■■ 41.4
VEGFA-215ENST00000497139 LRRC1Q9BTT6 524 aa14.5□□□□□ -0.09
VEGFA-215ENST00000497139 AATFQ9NY61 560 aaKnown RBP eCLIP14.5□□□□□ -0.092e-17■■□□□ 11.9
VEGFA-215ENST00000497139 PDHBP11177 359 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 IARSP41252 1262 aaKnown RBP14.49□□□□□ -0.09
VEGFA-215ENST00000497139 ATP1A2P50993 1020 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 ATP2B2Q01814 1243 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 GUCY1A3Q02108 690 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 TCP11X2Q5H9J9 407 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 AKAP4Q5JQC9 854 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 KLHL10Q6JEL2 608 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 THEMISQ8N1K5 641 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-215ENST00000497139 SPATA4Q8NEY3 305 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 TCP11Q8WWU5 503 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 AIFM3Q96NN9 605 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 JADE2Q9NQC1 790 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 DMGDHQ9UI17 866 aaKnown RBP14.49□□□□□ -0.09
VEGFA-215ENST00000497139 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-215ENST00000497139 RNF225M0QZC1 329 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-215ENST00000497139 KCNQ3O43525 872 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 CCT6AP40227 531 aaKnown RBP14.49□□□□□ -0.09
VEGFA-215ENST00000497139 CCNHP51946 323 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-215ENST00000497139 DPYDQ12882 1025 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 IFT20Q8IY31 132 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 GRAMD1CQ8IYS0 662 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 EBF2Q9HAK2 575 aa14.49□□□□□ -0.09
VEGFA-215ENST00000497139 UBN2Q6ZU65 1347 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 RGPD8O14715 1765 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-215ENST00000497139 C5orf60A6NFR6 353 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 M0R2C6 588 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 STX17P56962 302 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 INHBEP58166 350 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 PAK2Q13177 524 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 EPHA10Q5JZY3 1008 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 NBPF10Q6P3W6 841 aaKnown RBP14.48□□□□□ -0.09
VEGFA-215ENST00000497139 TTLL7Q6ZT98 887 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 TATDN2Q93075 761 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 CCDC47Q96A33 483 aaKnown RBP14.48□□□□□ -0.09
VEGFA-215ENST00000497139 SCLT1Q96NL6 688 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 ZNHIT6Q9NWK9 470 aaKnown RBP14.48□□□□□ -0.09
VEGFA-215ENST00000497139 ETAA1Q9NY74 926 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 MARF1Q9Y4F3 1742 aaKnown RBP14.48□□□□□ -0.09
VEGFA-215ENST00000497139 LMTK3Q96Q04 1460 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 LIN7AO14910 233 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-215ENST00000497139 TOB1P50616 345 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-215ENST00000497139 RWDD2BP57060 319 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 CDK17Q00537 523 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 ITGB3BPQ13352 177 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-215ENST00000497139 RIPK1Q13546 671 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 CDCA2Q69YH5 1023 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-215ENST00000497139 KDM4CQ9H3R0 1056 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 LGR6Q9HBX8 967 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 SEC31BQ9NQW1 1179 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 STRN4Q9NRL3 753 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 RNF14Q9UBS8 474 aa14.48□□□□□ -0.09
VEGFA-215ENST00000497139 ZNF233A6NK53 670 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms