RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 HTR3BO95264 441 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 HSP90AA1P07900 732 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 NBPF7P0C2Y1 421 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 U2AF1L5P0DN76 240 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 PF4V1P10720 104 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 FGFR1P11362 822 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 NME1P15531 152 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 NME2P22392 152 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 MCCP23508 829 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 IARSP41252 1262 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 CDK8P49336 464 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 ALDH5A1P51649 535 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 GTF2A2P52657 109 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 ZNF143P52747 638 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 USP14P54578 494 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 KCNQ4P56696 695 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 PPP2R2AP63151 447 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 SUMO1P63165 101 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 U2AF1Q01081 240 aaKnown RBP eCLIP2.38□□□□□ -2.034e-6■□□□□ 8.3
UBR4-217ENST00000497018 NUP160Q12769 1436 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 GRB10Q13322 594 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 SAFBQ15424 915 aaKnown RBP eCLIP2.38□□□□□ -2.03
UBR4-217ENST00000497018 SKOR2Q2VWA4 1001 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 LRRFIP1Q32MZ4 808 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 MINDY4Q4G0A6 757 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 SLC27A3Q5K4L6 730 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 DACT2Q5SW24 774 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 HYIQ5T013 277 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 CDCP2Q5VXM1 449 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 INTS3Q68E01 1043 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 SCARA3Q6AZY7 606 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 KIAA1211LQ6NV74 962 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 PDXDC1Q6P996 788 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 C16orf54Q6UWD8 224 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 B3GNT9Q6UX72 402 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 CHST15Q7LFX5 561 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 PDZD3Q86UT5 571 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 PPFIBP1Q86W92 1011 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 ZNF227Q86WZ6 799 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 SCUBE1Q8IWY4 988 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 DRC7Q8IY82 874 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 SMAP1Q8IYB5 467 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 CMTR2Q8IYT2 770 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 CPXCR1Q8N123 301 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 AHI1Q8N157 1196 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 CPA6Q8N4T0 437 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 PAF1Q8N7H5 531 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 TMEM102Q8N9M5 508 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 NGDNQ8NEJ9 315 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 VPS37AQ8NEZ2 397 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 IL17REQ8NFR9 667 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 GRIN3AQ8TCU5 1115 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 SNRNP27Q8WVK2 155 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 NXPE3Q969Y0 559 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 ATG4CQ96DT6 458 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 SLC9A7Q96T83 725 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 CDC5LQ99459 802 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 OSMRQ99650 979 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 AARSD1Q9BTE6 412 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 IFT22Q9H7X7 185 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 CNNM2Q9H8M5 875 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 EFCC1Q9HA90 598 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 TMEM39AQ9NV64 488 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 C9orf78Q9NZ63 289 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 CLIC5Q9NZA1 410 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 HCSTQ9UBK5 93 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 SUCOQ9UBS9 1254 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 GPN3Q9UHW5 284 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 ZNF214Q9UL59 606 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 KIAA1210Q9ULL0 1709 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 CYP8B1Q9UNU6 501 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 LUC7L2Q9Y383 392 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 TNPO3Q9Y5L0 923 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 DGKBQ9Y6T7 804 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 MORC2Q9Y6X9 1032 aaPredicted RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 ALKQ9UM73 1620 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 ZCCHC6Q5VYS8 1495 aaKnown RBP2.38□□□□□ -2.03
UBR4-217ENST00000497018 RAD54L2Q9Y4B4 1467 aa2.38□□□□□ -2.03
UBR4-217ENST00000497018 MAGI3Q5TCQ9 1506 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 PHLPP1O60346 1717 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 SOGA1O94964 1423 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 C9IYK1 514 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 M0R2C6 588 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 GFRA2O00451 464 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 WNT7AO00755 349 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ZRANB2O95218 330 aaKnown RBP eCLIP2.37□□□□□ -2.03
UBR4-217ENST00000497018 ITGBL1O95965 494 aaPredicted RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 B3GALT4O96024 378 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ALDH1A1P00352 501 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ASLP04424 464 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 RBP3P10745 1247 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 HSPA6P17066 643 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 RHCEP18577 417 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ADCYAP1R1P41586 468 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 GRIA2P42262 883 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 RNF144AP50876 292 aaPredicted RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 RHDQ02161 417 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 STK3Q13188 491 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 GTF2H3Q13889 308 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms