RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 BUD31P41223 144 aaPredicted RBP7.15□□□□□ -1.26
TRIM4-205ENST00000496896 RAP1GAPP47736 663 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 HDLBPQ00341 1268 aaKnown RBP7.15□□□□□ -1.26
TRIM4-205ENST00000496896 EGR3Q06889 387 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 NMIQ13287 307 aaPredicted RBP7.15□□□□□ -1.26
TRIM4-205ENST00000496896 KRTAP5-3Q6L8H2 238 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 NT5DC4Q86YG4 428 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 DAGLBQ8NCG7 672 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 FERD3LQ96RJ6 166 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 HDAC8Q9BY41 377 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 PRR13Q9NZ81 148 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 SLAMF8Q9P0V8 285 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 ZNF281Q9Y2X9 895 aa7.15□□□□□ -1.26
TRIM4-205ENST00000496896 DNAJC25-GNG10A0A024R161 153 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 SHISA3A0PJX4 238 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 RAC2P15153 192 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 LTKP29376 864 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 GJA8P48165 433 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 SOX9P48436 509 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 PAK2Q13177 524 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 KCNMB1Q16558 191 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 CLEC16AQ2KHT3 1053 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 LCNL1Q6ZST4 164 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 TTC6Q86TZ1 520 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 ZNF655Q8N720 491 aaPredicted RBP7.14□□□□□ -1.27
TRIM4-205ENST00000496896 KIRREL1Q96J84 757 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 SLC9A7Q96T83 725 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.14□□□□□ -1.27
TRIM4-205ENST00000496896 PCDHA11Q9Y5I1 949 aa7.14□□□□□ -1.27
TRIM4-205ENST00000496896 HPXP02790 462 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 GLI1P08151 1106 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 RALGPS1Q5JS13 557 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 RNF111Q6ZNA4 994 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 C1QL4Q86Z23 238 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 SIAH1Q8IUQ4 282 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 TMEM192Q8IY95 271 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 LRRC56Q8IYG6 542 aaPredicted RBP7.13□□□□□ -1.27
TRIM4-205ENST00000496896 PDZD8Q8NEN9 1154 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 DHX38Q92620 1227 aaKnown RBP7.13□□□□□ -1.27
TRIM4-205ENST00000496896 GPRASP2Q96D09 838 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 SLC6A18Q96N87 628 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 TGIF2Q9GZN2 237 aa7.13□□□□□ -1.27
TRIM4-205ENST00000496896 SUCOQ9UBS9 1254 aaKnown RBP7.13□□□□□ -1.27
TRIM4-205ENST00000496896 SIGLEC6O43699 453 aa7.12□□□□□ -1.27
TRIM4-205ENST00000496896 TSPAN15O95858 294 aa7.12□□□□□ -1.27
TRIM4-205ENST00000496896 ZGLP1P0C6A0 271 aa7.12□□□□□ -1.27
TRIM4-205ENST00000496896 ACRP10323 421 aa7.12□□□□□ -1.27
TRIM4-205ENST00000496896 TEKQ02763 1124 aa7.12□□□□□ -1.27
TRIM4-205ENST00000496896 NR0B2Q15466 257 aa7.12□□□□□ -1.27
TRIM4-205ENST00000496896 FYB2Q5VWT5 728 aa7.12□□□□□ -1.27
TRIM4-205ENST00000496896 SMARCC1Q92922 1105 aaPredicted RBP7.12□□□□□ -1.27
TRIM4-205ENST00000496896 SYTL4Q96C24 671 aaPredicted RBP7.12□□□□□ -1.27
TRIM4-205ENST00000496896 ADAMTS10Q9H324 1103 aa7.12□□□□□ -1.27
TRIM4-205ENST00000496896 ZNF503-AS2A6NEH8 195 aa7.11□□□□□ -1.27
TRIM4-205ENST00000496896 GUCY2CP25092 1073 aa7.11□□□□□ -1.27
TRIM4-205ENST00000496896 TMEM67Q5HYA8 995 aa7.11□□□□□ -1.27
TRIM4-205ENST00000496896 LILRA2Q8N149 483 aa7.11□□□□□ -1.27
TRIM4-205ENST00000496896 OXR1Q8N573 874 aa7.11□□□□□ -1.27
TRIM4-205ENST00000496896 LINC00116Q8NCU8 138 aa7.11□□□□□ -1.27
TRIM4-205ENST00000496896 PPP1R16BQ96T49 567 aa7.11□□□□□ -1.27
TRIM4-205ENST00000496896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.11□□□□□ -1.27
TRIM4-205ENST00000496896 RAPGEFL1Q9UHV5 662 aa7.11□□□□□ -1.27
TRIM4-205ENST00000496896 PPT2Q9UMR5 302 aa7.11□□□□□ -1.27
TRIM4-205ENST00000496896 FITM1A5D6W6 292 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.1□□□□□ -1.27
TRIM4-205ENST00000496896 ZSCAN22P10073 491 aaPredicted RBP7.1□□□□□ -1.27
TRIM4-205ENST00000496896 PMS1P54277 932 aaKnown RBP7.1□□□□□ -1.27
TRIM4-205ENST00000496896 CHRNEQ04844 493 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 DUSP4Q13115 394 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 MLANAQ16655 118 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 USHBP1Q8N6Y0 703 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 OR6P1Q8NGX9 317 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 LINC01599Q8WXQ3 324 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 PRDM14Q9GZV8 571 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 SP110Q9HB58 689 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 GINM1Q9NU53 330 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 PCDHB12Q9Y5F1 795 aa7.1□□□□□ -1.27
TRIM4-205ENST00000496896 PRAMEF1O95521 474 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 ENDOUP21128 410 aaKnown RBP7.09□□□□□ -1.27
TRIM4-205ENST00000496896 HK2P52789 917 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 PCBP3P57721 371 aaKnown RBP7.09□□□□□ -1.27
TRIM4-205ENST00000496896 SNW1Q13573 536 aaKnown RBP7.09□□□□□ -1.27
TRIM4-205ENST00000496896 AUHQ13825 339 aaKnown RBP7.09□□□□□ -1.27
TRIM4-205ENST00000496896 ANKRD39Q53RE8 183 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 TTLL10Q6ZVT0 673 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 LSRQ86X29 649 aaPredicted RBP7.09□□□□□ -1.27
TRIM4-205ENST00000496896 SPPL2CQ8IUH8 684 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 ANKS4BQ8N8V4 417 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 C19orf47Q8N9M1 422 aaKnown RBP7.09□□□□□ -1.27
TRIM4-205ENST00000496896 ABHD4Q8TB40 342 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 MYLIPQ8WY64 445 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 TCTN2Q96GX1 697 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 SEC16BQ96JE7 1060 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 MKRN2Q9H000 416 aaKnown RBP7.09□□□□□ -1.27
TRIM4-205ENST00000496896 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 SLC12A7Q9Y666 1083 aa7.09□□□□□ -1.27
TRIM4-205ENST00000496896 GIPRP48546 466 aa7.08□□□□□ -1.28
TRIM4-205ENST00000496896 BBS9Q3SYG4 887 aa7.08□□□□□ -1.28
TRIM4-205ENST00000496896 ANKLE2Q86XL3 938 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms