RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 ANKS3Q6ZW76 656 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 AFAP1Q8N556 730 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 MOSPD2Q8NHP6 518 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 BACH2Q9BYV9 841 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 EPC1Q9H2F5 836 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 TTF2Q9UNY4 1162 aaKnown RBP6.4□□□□□ -1.38
USF3-204ENST00000496826 NOD1Q9Y239 953 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 UTP11Q9Y3A2 253 aaKnown RBP6.4□□□□□ -1.38
USF3-204ENST00000496826 GNGT2O14610 69 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 UBA1P22314 1058 aaKnown RBP6.4□□□□□ -1.38
USF3-204ENST00000496826 IST1P53990 364 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 TMBIM6P55061 237 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 E2F4Q16254 413 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 CCNG2Q16589 344 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 MCMDC2Q4G0Z9 681 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 UBL4BQ8N7F7 174 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 FAM192AQ9GZU8 254 aa6.4□□□□□ -1.38
USF3-204ENST00000496826 SAP30BPQ9UHR5 308 aaKnown RBP6.4□□□□□ -1.38
USF3-204ENST00000496826 CCT8L1PA6NM43 557 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 PSMC3P17980 439 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 MYL5Q02045 173 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 DMPKQ09013 629 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 PKN1Q16512 942 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 NEK8Q86SG6 692 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 FBXL13Q8NEE6 735 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 LRRC39Q96DD0 335 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 NEUROD6Q96NK8 337 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 MNTQ99583 582 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 CNNM1Q9NRU3 951 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 EVA1BQ9NVM1 165 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 NPM3O75607 178 aaKnown RBP6.4□□□□□ -1.39
USF3-204ENST00000496826 SUN1O94901 812 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 APOA4P06727 396 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 PIK3CBP42338 1070 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 MRPS35P82673 323 aaKnown RBP6.4□□□□□ -1.39
USF3-204ENST00000496826 DHX9Q08211 1270 aaKnown RBP6.4□□□□□ -1.39
USF3-204ENST00000496826 OTOAQ7RTW8 1153 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 KCNH8Q96L42 1107 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.4□□□□□ -1.39
USF3-204ENST00000496826 NBPF3Q9H094 633 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 GLT8D2Q9H1C3 349 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 KRCC1Q9NPI7 259 aaPredicted RBP6.4□□□□□ -1.39
USF3-204ENST00000496826 EXOC1Q9NV70 894 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 ADD3Q9UEY8 706 aaKnown RBP6.4□□□□□ -1.39
USF3-204ENST00000496826 FAM47E-STBD1D6RA91 191 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 PSMD11O00231 422 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 SRGAP2CP0DJJ0 459 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 PSME3P61289 254 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 PSMC6P62333 389 aa6.4□□□□□ -1.39
USF3-204ENST00000496826 SFSWAPQ12872 951 aaKnown RBP6.4□□□□□ -1.39
USF3-204ENST00000496826 JPH2Q9BR39 696 aaPredicted RBP6.4□□□□□ -1.39
USF3-204ENST00000496826 MAP3K15Q6ZN16 1313 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 ATP5J2-PTCD1G3V325 749 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 WWP2O00308 870 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 SSTP61278 116 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 DCTN2Q13561 401 aaKnown RBP6.39□□□□□ -1.39
USF3-204ENST00000496826 IYDQ6PHW0 289 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 KRT27Q7Z3Y8 459 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 PHACTR3Q96KR7 559 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 CARD6Q9BX69 1037 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 FAM129AQ9BZQ8 928 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 RBSNQ9H1K0 784 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 FANCEQ9HB96 536 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 ARHGEF3Q9NR81 526 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 RLBP1P12271 317 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 MTTPP55157 894 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 MTMR3Q13615 1198 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 PRPSAP1Q14558 356 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 NBPF20Q3BBV1 942 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 TAGAPQ8N103 731 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 PPP1R14AQ96A00 147 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 INTS4Q96HW7 963 aaKnown RBP6.39□□□□□ -1.39
USF3-204ENST00000496826 TMEM245Q9H330 911 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 GPHNQ9NQX3 736 aaPredicted RBP6.39□□□□□ -1.39
USF3-204ENST00000496826 AGTPBP1Q9UPW5 1226 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 MX2P20592 715 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 RPL13P26373 211 aaKnown RBP6.39□□□□□ -1.39
USF3-204ENST00000496826 PURAQ00577 322 aaKnown RBP6.39□□□□□ -1.39
USF3-204ENST00000496826 GRM1Q13255 1194 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 WDR44Q5JSH3 913 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 PPP4R3CPQ6ZMV5 832 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 PPP1R36Q96LQ0 422 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 CNBD2Q96M20 576 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 ADNPQ9H2P0 1102 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 CDC45O75419 566 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 NBPF7P0C2Y1 421 aaPredicted RBP6.39□□□□□ -1.39
USF3-204ENST00000496826 GSTO1P78417 241 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 IRAK1BP1Q5VVH5 260 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 SERPINI1Q99574 410 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 YY1AP1Q9H869 796 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 RWDD3Q9Y3V2 267 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 SAC3D1A6NKF1 404 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 DIAPH2O60879 1101 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 KRT14P02533 472 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 NCAM1P13591 858 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 ACADSP16219 412 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 MCCD1P59942 119 aaPredicted RBP6.39□□□□□ -1.39
USF3-204ENST00000496826 APBA1Q02410 837 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 SLC10A5Q5PT55 438 aa6.39□□□□□ -1.39
USF3-204ENST00000496826 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms