RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 ZHX2Q9Y6X8 837 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 SPDYE5A6NIY4 337 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 LARGE1O95461 756 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 PDHBP11177 359 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 RXRAP19793 462 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 CCT2P78371 535 aaKnown RBP11.6□□□□□ -0.55
C4A-258ENST00000496659 JAG1P78504 1218 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 AKAP17AQ02040 695 aaKnown RBP11.6□□□□□ -0.55
C4A-258ENST00000496659 SHROOM1Q2M3G4 852 aaPredicted RBP11.6□□□□□ -0.55
C4A-258ENST00000496659 LDLRAD1Q5T700 205 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 USP17L2Q6R6M4 530 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 CCDC144CPQ8IYA2 1237 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 HHIPL1Q96JK4 782 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 ELP3Q9H9T3 547 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 FZD1Q9UP38 647 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 MTMR7Q9Y216 660 aa11.6□□□□□ -0.55
C4A-258ENST00000496659 MYH4Q9Y623 1939 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 FAM155AB1AL88 458 aaPredicted RBP11.59□□□□□ -0.55
C4A-258ENST00000496659 F5H6K3 240 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 WDR46O15213 610 aaKnown RBP11.59□□□□□ -0.55
C4A-258ENST00000496659 NDUFB10O96000 172 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 SNHG28P0DPA3 235 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 BMP3P12645 472 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 SMARCA1P28370 1054 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 BACE1P56817 501 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 KLRC3Q07444 240 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 PPIL2Q13356 520 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 MTMR2Q13614 643 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 MOB2Q70IA6 237 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 RAB11FIP4Q86YS3 637 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 NECAB1Q8N987 351 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 WASF1Q92558 559 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 STK36Q9NRP7 1315 aa11.59□□□□□ -0.55
C4A-258ENST00000496659 A0A1W2PRG0 241 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 PTPDC1A2A3K4 754 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 TRIM75PA6NK02 468 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 UBE2Q2LH0YL09 131 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 CXCL11O14625 94 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 PDIA4P13667 645 aaKnown RBP11.58□□□□□ -0.56
C4A-258ENST00000496659 IFNAR1P17181 557 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 ZNF543Q08ER8 600 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 SPP2Q13103 211 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 IKQ13123 557 aaPredicted RBP11.58□□□□□ -0.56
C4A-258ENST00000496659 ZYXQ15942 572 aaKnown RBP11.58□□□□□ -0.56
C4A-258ENST00000496659 RGMBQ6NW40 437 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 TMTC3Q6ZXV5 915 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 FAM160B2Q86V87 743 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 SIAH1Q8IUQ4 282 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 FAM184AQ8NB25 1140 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 ACER1Q8TDN7 264 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 OTUD5Q96G74 571 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 C12orf42Q96LP6 360 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 RNF26Q9BY78 433 aaPredicted RBP11.58□□□□□ -0.56
C4A-258ENST00000496659 NCOA5Q9HCD5 579 aaKnown RBP11.58□□□□□ -0.56
C4A-258ENST00000496659 CWC22Q9HCG8 908 aaKnown RBP11.58□□□□□ -0.56
C4A-258ENST00000496659 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.58□□□□□ -0.56
C4A-258ENST00000496659 AFG3L2Q9Y4W6 797 aa11.58□□□□□ -0.56
C4A-258ENST00000496659 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
C4A-258ENST00000496659 KLRF2D3W0D1 207 aa11.57□□□□□ -0.56
C4A-258ENST00000496659 ZBTB48P10074 688 aaPredicted RBP11.57□□□□□ -0.56
C4A-258ENST00000496659 XBP1P17861 261 aa11.57□□□□□ -0.56
C4A-258ENST00000496659 PDCP20941 246 aa11.57□□□□□ -0.56
C4A-258ENST00000496659 STAT2P52630 851 aa11.57□□□□□ -0.56
C4A-258ENST00000496659 SSRP1Q08945 709 aaKnown RBP11.57□□□□□ -0.56
C4A-258ENST00000496659 PABPC4Q13310 644 aaKnown RBP eCLIP11.57□□□□□ -0.56
C4A-258ENST00000496659 SH3D19Q5HYK7 790 aa11.57□□□□□ -0.56
C4A-258ENST00000496659 CCDC84Q86UT8 332 aaPredicted RBP11.57□□□□□ -0.56
C4A-258ENST00000496659 CHURC1Q8WUH1 139 aa11.57□□□□□ -0.56
C4A-258ENST00000496659 BEGAINQ9BUH8 593 aa11.57□□□□□ -0.56
C4A-258ENST00000496659 SPZ1Q9BXG8 430 aa11.57□□□□□ -0.56
C4A-258ENST00000496659 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.57□□□□□ -0.56
C4A-258ENST00000496659 SEC63Q9UGP8 760 aaKnown RBP11.57□□□□□ -0.56
C4A-258ENST00000496659 MAD2L2Q9UI95 211 aa11.57□□□□□ -0.56
C4A-258ENST00000496659 FRMPD2Q68DX3 1309 aaPredicted RBP11.57□□□□□ -0.56
C4A-258ENST00000496659 DEXIO95424 95 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
C4A-258ENST00000496659 CDC27P30260 824 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 ADD1P35611 737 aaKnown RBP11.56□□□□□ -0.56
C4A-258ENST00000496659 ZNF157P51786 506 aaPredicted RBP11.56□□□□□ -0.56
C4A-258ENST00000496659 HMGCS2P54868 508 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 KIF23Q02241 960 aaPredicted RBP11.56□□□□□ -0.56
C4A-258ENST00000496659 ST3GAL1Q11201 340 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 TRAF1Q13077 416 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 SNAPC2Q13487 334 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 FASTKD5Q7L8L6 764 aaKnown RBP11.56□□□□□ -0.56
C4A-258ENST00000496659 SPICE1Q8N0Z3 855 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 PROCA1Q8NCQ7 364 aaPredicted RBP11.56□□□□□ -0.56
C4A-258ENST00000496659 NSUN7Q8NE18 718 aaKnown RBP11.56□□□□□ -0.56
C4A-258ENST00000496659 SMARCC2Q8TAQ2 1214 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 RRP36Q96EU6 259 aaKnown RBP11.56□□□□□ -0.56
C4A-258ENST00000496659 CLMNQ96JQ2 1002 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 SLC26A6Q9BXS9 759 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 FEM1BQ9UK73 627 aa11.56□□□□□ -0.56
C4A-258ENST00000496659 KCNH4Q9UQ05 1017 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms