RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 ECM2O94769 699 aaPredicted RBP9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 MAPK4P31152 587 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 SLC9C1Q4G0N8 1177 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 NFXL1Q6ZNB6 911 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 NOL8Q76FK4 1167 aaKnown RBP9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 IQCA1Q86XH1 822 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 MB21D1Q8N884 522 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 ESR2Q92731 530 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 TRIM47Q96LD4 638 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 P2RX7Q99572 595 aaKnown RBP9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 ZKSCAN3Q9BRR0 538 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 LRRC2Q9BYS8 371 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 CNNM2Q9H8M5 875 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 TSHZ2Q9NRE2 1034 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 PDRG1Q9NUG6 133 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 ZSWIM5Q9P217 1185 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 MORF4L1Q9UBU8 362 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 SRRDQ9UH36 339 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 STX8Q9UNK0 236 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 HPS5Q9UPZ3 1129 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 RABGAP1Q9Y3P9 1069 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 TAF6LQ9Y6J9 622 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 MGAMO43451 1857 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 PLIN4Q96Q06 1357 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 MYH4Q9Y623 1939 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 A0A1W2PRG0 241 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 ERICH2A1L162 156 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 IFIT3O14879 490 aaKnown RBP9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 KDM4AO75164 1064 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 HMGB1P09429 215 aaKnown RBP9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 MCM5P33992 734 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 RBM25P49756 843 aaKnown RBP9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 ERVK-9P63128 1117 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 ERVK-24P63145 666 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 UBXN2AP68543 259 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 WDR78Q5VTH9 848 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 SAMD1Q6SPF0 538 aaPredicted RBP9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 LBX2Q6XYB7 198 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 SPICE1Q8N0Z3 855 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 STAG1Q8WVM7 1258 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 CEP95Q96GE4 821 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 TCEANC2Q96MN5 208 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 TMEM106CQ9BVX2 250 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 UPF3BQ9BZI7 483 aaKnown RBP9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 MTMR4Q9NYA4 1195 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 IVNS1ABPQ9Y6Y0 642 aa9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 GREB1LQ9C091 1923 aaPredicted RBP9.58□□□□□ -0.88
SMARCD3-215ENST00000496530 LAMA4Q16363 1823 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 F5H6K3 240 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 PRC1O43663 620 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 COPB2P35606 906 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 ANAPC15P60006 121 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 KLRC3Q07444 240 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 IKQ13123 557 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 TSGA10IPQ3SY00 556 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 Q6ZUG5 572 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 RUFY3Q7L099 469 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 CLEC10AQ8IUN9 316 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 TBC1D10CQ8IV04 446 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 SLAIN1Q8ND83 568 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 GMCL1P1Q8NEA9 526 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 SOCS4Q8WXH5 440 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 MKL1Q969V6 931 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 NUDT12Q9BQG2 462 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 UBAC1Q9BSL1 405 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 ARHGAP39Q9C0H5 1083 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 BIN2Q9UBW5 565 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 MTMR7Q9Y216 660 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 RBM19Q9Y4C8 960 aaKnown RBP9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 TACC3Q9Y6A5 838 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 PTCH2Q9Y6C5 1203 aa9.57□□□□□ -0.88
SMARCD3-215ENST00000496530 IGKV6D-41A0A0C4DH26 115 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 SPDYE16A6NNV3 312 aaPredicted RBP9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 ST18O60284 1047 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 SLC25A27O95847 323 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 FGRP09769 529 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 FDX1P10109 184 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 GRK4P32298 578 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 SLC1A4P43007 532 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 PRKCZQ05513 592 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 PLS1Q14651 629 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 SART3Q15020 963 aaKnown RBP9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 RABEP1Q15276 862 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 TMEM67Q5HYA8 995 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 FAM83BQ5T0W9 1011 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 SLFN13Q68D06 897 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 SYNE3Q6ZMZ3 975 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 STOX1Q6ZVD7 989 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 CYB5R4Q7L1T6 521 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 PLEKHH3Q7Z736 793 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 TRMT44Q8IYL2 757 aaKnown RBP9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 LRRC47Q8N1G4 583 aaKnown RBP9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 SPRYD3Q8NCJ5 442 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 CHURC1Q8WUH1 139 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 KCNB2Q92953 911 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 TTC14Q96N46 770 aa9.56□□□□□ -0.88
SMARCD3-215ENST00000496530 SLF1Q9BQI6 1058 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms