RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 ZMYM5Q9UJ78 669 aa8.15□□□□□ -1.1
CLTC-208ENST00000496076 USP2O75604 605 aaPredicted RBP8.14□□□□□ -1.11
CLTC-208ENST00000496076 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
CLTC-208ENST00000496076 SLC14A2Q15849 920 aa8.14□□□□□ -1.11
CLTC-208ENST00000496076 WAPLQ7Z5K2 1190 aa8.14□□□□□ -1.11
CLTC-208ENST00000496076 RELL1Q8IUW5 271 aa8.14□□□□□ -1.11
CLTC-208ENST00000496076 SYTL5Q8TDW5 730 aaPredicted RBP8.14□□□□□ -1.11
CLTC-208ENST00000496076 MBD1Q9UIS9 605 aaPredicted RBP8.14□□□□□ -1.11
CLTC-208ENST00000496076 TRIM13O60858 407 aa8.13□□□□□ -1.11
CLTC-208ENST00000496076 GBP2P32456 591 aaPredicted RBP8.13□□□□□ -1.11
CLTC-208ENST00000496076 XPCQ01831 940 aaPredicted RBP8.13□□□□□ -1.11
CLTC-208ENST00000496076 PANK1Q8TE04 598 aa8.13□□□□□ -1.11
CLTC-208ENST00000496076 RHOVQ96L33 236 aa8.13□□□□□ -1.11
CLTC-208ENST00000496076 FAM161BQ96MY7 647 aa8.13□□□□□ -1.11
CLTC-208ENST00000496076 TMEM74Q96NL1 305 aa8.13□□□□□ -1.11
CLTC-208ENST00000496076 HDAC8Q9BY41 377 aa8.13□□□□□ -1.11
CLTC-208ENST00000496076 FOXP3Q9BZS1 431 aa8.13□□□□□ -1.11
CLTC-208ENST00000496076 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
CLTC-208ENST00000496076 NRDCO43847 1150 aa8.12□□□□□ -1.11
CLTC-208ENST00000496076 PI3P19957 117 aa8.12□□□□□ -1.11
CLTC-208ENST00000496076 TMC4Q7Z404 712 aa8.12□□□□□ -1.11
CLTC-208ENST00000496076 DAGLBQ8NCG7 672 aa8.12□□□□□ -1.11
CLTC-208ENST00000496076 TCTN2Q96GX1 697 aa8.12□□□□□ -1.11
CLTC-208ENST00000496076 SIGLEC10Q96LC7 697 aa8.12□□□□□ -1.11
CLTC-208ENST00000496076 RSRP1Q9BUV0 290 aa8.12□□□□□ -1.11
CLTC-208ENST00000496076 CRTAC1Q9NQ79 661 aa8.12□□□□□ -1.11
CLTC-208ENST00000496076 IRAK3Q9Y616 596 aa8.12□□□□□ -1.11
CLTC-208ENST00000496076 SSU72P8A0A1W2PR75 194 aa8.11□□□□□ -1.11
CLTC-208ENST00000496076 HRKO00198 91 aa8.11□□□□□ -1.11
CLTC-208ENST00000496076 RGS13O14921 159 aa8.11□□□□□ -1.11
CLTC-208ENST00000496076 KIR2DL1P43626 348 aaPredicted RBP8.11□□□□□ -1.11
CLTC-208ENST00000496076 KIR2DL2P43627 348 aaPredicted RBP8.11□□□□□ -1.11
CLTC-208ENST00000496076 FAM160A1Q05DH4 1040 aa8.11□□□□□ -1.11
CLTC-208ENST00000496076 CEP128Q6ZU80 1094 aa8.11□□□□□ -1.11
CLTC-208ENST00000496076 MAP6Q96JE9 813 aa8.11□□□□□ -1.11
CLTC-208ENST00000496076 TCFL5Q9UL49 500 aa8.11□□□□□ -1.11
CLTC-208ENST00000496076 MINDY4BA8MYZ0 360 aa8.1□□□□□ -1.11
CLTC-208ENST00000496076 PATL2C9JE40 543 aaKnown RBP8.1□□□□□ -1.11
CLTC-208ENST00000496076 PCBP3P57721 371 aaKnown RBP8.1□□□□□ -1.11
CLTC-208ENST00000496076 MPP2Q14168 576 aa8.1□□□□□ -1.11
CLTC-208ENST00000496076 NFIXQ14938 502 aa8.1□□□□□ -1.11
CLTC-208ENST00000496076 SNAP47Q5SQN1 464 aa8.1□□□□□ -1.11
CLTC-208ENST00000496076 REC114Q7Z4M0 266 aa8.1□□□□□ -1.11
CLTC-208ENST00000496076 ZNF655Q8N720 491 aaPredicted RBP8.1□□□□□ -1.11
CLTC-208ENST00000496076 GOLM1Q8NBJ4 401 aa8.1□□□□□ -1.11
CLTC-208ENST00000496076 FBXO27Q8NI29 283 aa8.1□□□□□ -1.11
CLTC-208ENST00000496076 ADAMTS20P59510 1910 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 TMEM82A0PJX8 343 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 SLC22A31A6NKX4 558 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 SDHBP21912 280 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 VIPR1P32241 457 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 EPHB3P54753 998 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 RNF4P78317 190 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 TMC3Q7Z5M5 1100 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 DACT3Q96B18 629 aaPredicted RBP8.09□□□□□ -1.11
CLTC-208ENST00000496076 CRELD1Q96HD1 420 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 HHIPL1Q96JK4 782 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 CNTD2Q9H8S5 307 aa8.09□□□□□ -1.11
CLTC-208ENST00000496076 FKTNO75072 461 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 SASH1O94885 1247 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 UBOX5O94941 541 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 PNLIPP16233 465 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 PWP1Q13610 501 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 MLECQ14165 292 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 NBPF9Q3BBW0 867 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 ARSHQ5FYA8 562 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 ZPBP2Q6X784 338 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 LINC00116Q8NCU8 138 aa8.08□□□□□ -1.12
CLTC-208ENST00000496076 N4BP3O15049 544 aa8.07□□□□□ -1.12
CLTC-208ENST00000496076 SYPP08247 313 aa8.07□□□□□ -1.12
CLTC-208ENST00000496076 RAG1P15918 1043 aa8.07□□□□□ -1.12
CLTC-208ENST00000496076 SYN1P17600 705 aa8.07□□□□□ -1.12
CLTC-208ENST00000496076 AFF3P51826 1226 aaKnown RBP8.07□□□□□ -1.12
CLTC-208ENST00000496076 NBPF12Q5TAG4 269 aaPredicted RBP8.07□□□□□ -1.12
CLTC-208ENST00000496076 TRAIPQ9BWF2 469 aa8.07□□□□□ -1.12
CLTC-208ENST00000496076 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLTC-208ENST00000496076 XYLT2Q9H1B5 865 aa8.07□□□□□ -1.12
CLTC-208ENST00000496076 RTEL1Q9NZ71 1219 aa8.07□□□□□ -1.12
CLTC-208ENST00000496076 TLR3O15455 904 aaKnown RBP8.06□□□□□ -1.12
CLTC-208ENST00000496076 GARTP22102 1010 aa8.06□□□□□ -1.12
CLTC-208ENST00000496076 RTP1P59025 263 aa8.06□□□□□ -1.12
CLTC-208ENST00000496076 YBX1P67809 324 aaKnown RBP8.06□□□□□ -1.12
CLTC-208ENST00000496076 SNW1Q13573 536 aaKnown RBP8.06□□□□□ -1.12
CLTC-208ENST00000496076 FAM196AQ6ZSG2 479 aa8.06□□□□□ -1.12
CLTC-208ENST00000496076 PLCD4Q9BRC7 762 aa8.06□□□□□ -1.12
CLTC-208ENST00000496076 EPB41L4AQ9HCS5 686 aaPredicted RBP8.06□□□□□ -1.12
CLTC-208ENST00000496076 OTOL1A6NHN0 477 aaPredicted RBP8.05□□□□□ -1.12
CLTC-208ENST00000496076 SORBS3O60504 671 aa8.05□□□□□ -1.12
CLTC-208ENST00000496076 BBS9Q3SYG4 887 aa8.05□□□□□ -1.12
CLTC-208ENST00000496076 JAG2Q9Y219 1238 aa8.05□□□□□ -1.12
CLTC-208ENST00000496076 ABLIM1O14639 778 aa8.04□□□□□ -1.12
CLTC-208ENST00000496076 PRAMEF1O95521 474 aa8.04□□□□□ -1.12
CLTC-208ENST00000496076 ERVFRD-1P60508 538 aa8.04□□□□□ -1.12
CLTC-208ENST00000496076 VMACQ2NL98 169 aa8.04□□□□□ -1.12
CLTC-208ENST00000496076 OLFML2BQ68BL8 750 aa8.04□□□□□ -1.12
CLTC-208ENST00000496076 SND1Q7KZF4 910 aaKnown RBP eCLIP8.04□□□□□ -1.122e-6■■■□□ 16.4
CLTC-208ENST00000496076 CXorf38Q8TB03 319 aa8.04□□□□□ -1.12
CLTC-208ENST00000496076 MZB1Q8WU39 189 aa8.04□□□□□ -1.12
CLTC-208ENST00000496076 BRMS1Q9HCU9 246 aa8.04□□□□□ -1.12
CLTC-208ENST00000496076 PCDHB14Q9Y5E9 798 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms