RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 USP17L11C9JVI0 530 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 USP17L18D6R9N7 530 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 USP17L22D6RA61 530 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 USP17L17D6RBQ6 530 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 USP17L19D6RCP7 530 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 USP17L20D6RJB6 530 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 APAF1O14727 1248 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 SEMA3EO15041 775 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 IGHA2P01877 340 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 ALADP13716 330 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 ADORA2AP29274 412 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 NUP133Q8WUM0 1156 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 MTCH2Q9Y6C9 303 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 MYH2Q9UKX2 1941 aa11.93□□□□□ -0.5
SMARCAL1-213ENST00000496037 RAD21O60216 631 aa11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 ALDH1L1O75891 902 aa11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 PGK1P00558 417 aa11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 PRAMEF19Q5SWL8 479 aa11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 PTCD2Q8WV60 388 aaKnown RBP11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 FEZ1Q99689 392 aa11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 TRIM34Q9BYJ4 488 aa11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 ABCF2Q9UG63 623 aa11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 ZNF236Q9UL36 1845 aa11.92□□□□□ -0.5
SMARCAL1-213ENST00000496037 STRNO43815 780 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 EIF5BO60841 1220 aaKnown RBP11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 RABGGTBP53611 331 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 RHBDL3P58872 404 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 MFSD10Q14728 455 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 SMYD5Q6GMV2 418 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 GJD3Q8N144 294 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 KLHDC4Q8TBB5 520 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 KAZALD1Q96I82 304 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 HS3ST6Q96QI5 342 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 PPP1R12CQ9BZL4 782 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 SRCIN1Q9C0H9 1055 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 CD320Q9NPF0 282 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 IL23AQ9NPF7 189 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 GINM1Q9NU53 330 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 PI4KBQ9UBF8 816 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 C5orf42Q9H799 3197 aa11.91□□□□□ -0.5
SMARCAL1-213ENST00000496037 GPR75-ASB3A0A0A6YYF3 556 aa11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 GDF11O95390 407 aa11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 FGBP02675 491 aa11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 POU3F3P20264 500 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 ZYXQ15942 572 aaKnown RBP11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 RABL6Q3YEC7 729 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 SLC4A10Q6U841 1118 aa11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 CRACR2BQ8N4Y2 399 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 BTBD7Q9P203 1132 aa11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 NRBP1Q9UHY1 535 aa11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 ZBTB21Q9ULJ3 1066 aa11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 PCDHA11Q9Y5I1 949 aa11.9□□□□□ -0.5
SMARCAL1-213ENST00000496037 MOXD2PA6NHM9 499 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 ACLYP53396 1101 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 USP14P54578 494 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 ATP2B3Q16720 1220 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 LBX2Q6XYB7 198 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 OTOP2Q7RTS6 562 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 C12orf42Q96LP6 360 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 TSEN34Q9BSV6 310 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 TRAIPQ9BWF2 469 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 SLC4A7Q9Y6M7 1214 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 ROBO3Q96MS0 1386 aa11.89□□□□□ -0.51
SMARCAL1-213ENST00000496037 EYA2O00167 538 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 RFXAPO00287 272 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 TLR3O15455 904 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 NUDT7P0C024 238 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 AKR1A1P14550 325 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 MYOGP15173 224 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 PHKA1P46020 1223 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 CATSPERGQ6ZRH7 1159 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 TEX11Q8IYF3 940 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 MAML3Q96JK9 1138 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 GLT1D1Q96MS3 346 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 DHX36Q9H2U1 1008 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 GBF1Q92538 1859 aa11.88□□□□□ -0.51
SMARCAL1-213ENST00000496037 A0A0G2JMZ2 1700 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 SPDYE16A6NNV3 312 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 ZBBXA8MT70 800 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 DCXO43602 365 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 COBLO75128 1261 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 VCAM1P19320 739 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 CDK11BP21127 795 aaKnown RBP11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 GSTO1P78417 241 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 JAG1P78504 1218 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 MECOMQ03112 1051 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 KRT40Q6A162 431 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 MOV10L1Q9BXT6 1211 aaKnown RBP11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 CERS4Q9HA82 394 aa11.87□□□□□ -0.51
SMARCAL1-213ENST00000496037 PRRC2BQ5JSZ5 2229 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 ADAMTS4O75173 837 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 CA3P07451 260 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms