RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 USP17L18D6R9N7 530 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 USP17L22D6RA61 530 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 USP17L17D6RBQ6 530 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 USP17L19D6RCP7 530 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 USP17L20D6RJB6 530 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 PQBP1O60828 265 aaKnown RBP16.15■□□□□ 0.18
TFE3-205ENST00000495940 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
TFE3-205ENST00000495940 GH2P01242 217 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 LDHCP07864 332 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 VCAM1P19320 739 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 ADORA2AP29274 412 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 MRPS5P82675 430 aaKnown RBP16.15■□□□□ 0.18
TFE3-205ENST00000495940 USP17L24Q0WX57 530 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 C1orf53Q5VUE5 145 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 TNPO1Q92973 898 aaKnown RBP16.15■□□□□ 0.18
TFE3-205ENST00000495940 TRIM34Q9BYJ4 488 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 AATFQ9NY61 560 aaKnown RBP eCLIP16.15■□□□□ 0.18
TFE3-205ENST00000495940 SAP30BPQ9UHR5 308 aaKnown RBP16.15■□□□□ 0.18
TFE3-205ENST00000495940 PALD1Q9ULE6 856 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 TACC3Q9Y6A5 838 aa16.15■□□□□ 0.18
TFE3-205ENST00000495940 ZNFX1Q9P2E3 1918 aaKnown RBP16.14■□□□□ 0.17
TFE3-205ENST00000495940 KIAA0355O15063 1070 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 HSP90AB4PQ58FF6 505 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 AKNAD1Q5T1N1 836 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 OLFML2BQ68BL8 750 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 CATSPERGQ6ZRH7 1159 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 DPP9Q86TI2 863 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 METTL16Q86W50 562 aaKnown RBP16.14■□□□□ 0.17
TFE3-205ENST00000495940 TGFBRAP1Q8WUH2 860 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 MEIS3Q99687 375 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.14■□□□□ 0.17
TFE3-205ENST00000495940 PBX4Q9BYU1 374 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 LRRCC1Q9C099 1032 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 DHX36Q9H2U1 1008 aaKnown RBP16.14■□□□□ 0.17
TFE3-205ENST00000495940 PARP14Q460N5 1801 aa16.14■□□□□ 0.17
TFE3-205ENST00000495940 UBTFL1P0CB47 393 aaPredicted RBP16.13■□□□□ 0.17
TFE3-205ENST00000495940 SDSP20132 328 aa16.13■□□□□ 0.17
TFE3-205ENST00000495940 SPATA5Q8NB90 893 aa16.13■□□□□ 0.17
TFE3-205ENST00000495940 PHF24Q9UPV7 400 aa16.13■□□□□ 0.17
TFE3-205ENST00000495940 SYNGAP1Q96PV0 1343 aa16.13■□□□□ 0.17
TFE3-205ENST00000495940 COL11A1P12107 1806 aaPredicted RBP16.12■□□□□ 0.17
TFE3-205ENST00000495940 COBLO75128 1261 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 IGFBP4P22692 258 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 PDE1AP54750 535 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 TFCP2Q12800 502 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 LBX2Q6XYB7 198 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 CCDC129Q6ZRS4 1044 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 ADGRA1Q86SQ6 560 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 ACER1Q8TDN7 264 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 LENG1Q96BZ8 264 aaPredicted RBP16.12■□□□□ 0.17
TFE3-205ENST00000495940 MOV10L1Q9BXT6 1211 aaKnown RBP16.12■□□□□ 0.17
TFE3-205ENST00000495940 GINM1Q9NU53 330 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 TMEM39AQ9NV64 488 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 BRPF3Q9ULD4 1205 aa16.12■□□□□ 0.17
TFE3-205ENST00000495940 LRRC37A2A6NM11 1700 aa16.11■□□□□ 0.17
TFE3-205ENST00000495940 A0A1W2PQ45 241 aaPredicted RBP16.11■□□□□ 0.17
TFE3-205ENST00000495940 A0A1W2PQY0 241 aa16.11■□□□□ 0.17
TFE3-205ENST00000495940 PGK1P00558 417 aa16.11■□□□□ 0.17
TFE3-205ENST00000495940 MCAMP43121 646 aa16.11■□□□□ 0.17
TFE3-205ENST00000495940 NOL10Q9BSC4 688 aaKnown RBP16.11■□□□□ 0.17
TFE3-205ENST00000495940 RPAP3Q9H6T3 665 aaPredicted RBP16.11■□□□□ 0.17
TFE3-205ENST00000495940 COPRSQ9NQ92 184 aa16.11■□□□□ 0.17
TFE3-205ENST00000495940 XPNPEP3Q9NQH7 507 aa16.11■□□□□ 0.17
TFE3-205ENST00000495940 TFF2Q03403 129 aa16.1■□□□□ 0.17
TFE3-205ENST00000495940 FAAP100Q0VG06 881 aa16.1■□□□□ 0.17
TFE3-205ENST00000495940 FOXP4Q8IVH2 680 aaPredicted RBP16.1■□□□□ 0.17
TFE3-205ENST00000495940 NEUROD6Q96NK8 337 aa16.1■□□□□ 0.17
TFE3-205ENST00000495940 C1QTNF1Q9BXJ1 281 aa16.1■□□□□ 0.17
TFE3-205ENST00000495940 LRP2BPQ9P2M1 347 aa16.1■□□□□ 0.17
TFE3-205ENST00000495940 NAV1Q8NEY1 1877 aa16.1■□□□□ 0.17
TFE3-205ENST00000495940 ERCC3P19447 782 aa16.09■□□□□ 0.17
TFE3-205ENST00000495940 ARID4AP29374 1257 aaPredicted RBP16.09■□□□□ 0.17
TFE3-205ENST00000495940 KCNQ1P51787 676 aa16.09■□□□□ 0.17
TFE3-205ENST00000495940 KLHL40Q2TBA0 621 aa16.09■□□□□ 0.17
TFE3-205ENST00000495940 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
TFE3-205ENST00000495940 SLC44A5Q8NCS7 719 aa16.09■□□□□ 0.17
TFE3-205ENST00000495940 LRFN3Q9BTN0 628 aa16.09■□□□□ 0.17
TFE3-205ENST00000495940 KIAA1683Q9H0B3 1180 aa16.09■□□□□ 0.17
TFE3-205ENST00000495940 HCN4Q9Y3Q4 1203 aa16.09■□□□□ 0.17
TFE3-205ENST00000495940 SALL3Q9BXA9 1300 aa16.09■□□□□ 0.17
TFE3-205ENST00000495940 HLA-DOAP06340 250 aa16.08■□□□□ 0.16
TFE3-205ENST00000495940 TMEM240Q5SV17 173 aa16.08■□□□□ 0.16
TFE3-205ENST00000495940 C16orf59Q7L2K0 433 aa16.08■□□□□ 0.16
TFE3-205ENST00000495940 MICALL1Q8N3F8 863 aa16.08■□□□□ 0.16
TFE3-205ENST00000495940 SPRYD3Q8NCJ5 442 aa16.08■□□□□ 0.16
TFE3-205ENST00000495940 INTS4Q96HW7 963 aaKnown RBP16.08■□□□□ 0.16
TFE3-205ENST00000495940 MAML3Q96JK9 1138 aa16.08■□□□□ 0.16
TFE3-205ENST00000495940 SPATC1LQ9H0A9 340 aa16.08■□□□□ 0.16
TFE3-205ENST00000495940 EPHX3Q9H6B9 360 aa16.08■□□□□ 0.16
TFE3-205ENST00000495940 BAG3O95817 575 aa16.07■□□□□ 0.16
TFE3-205ENST00000495940 RARBP10826 455 aa16.07■□□□□ 0.16
TFE3-205ENST00000495940 XRCC6P12956 609 aaKnown RBP eCLIP16.07■□□□□ 0.16
TFE3-205ENST00000495940 BMP1P13497 986 aa16.07■□□□□ 0.16
TFE3-205ENST00000495940 MX1P20591 662 aa16.07■□□□□ 0.16
TFE3-205ENST00000495940 USP14P54578 494 aa16.07■□□□□ 0.16
TFE3-205ENST00000495940 DYNLL1P63167 89 aaKnown RBP16.07■□□□□ 0.16
TFE3-205ENST00000495940 SSH3Q8TE77 659 aa16.07■□□□□ 0.16
TFE3-205ENST00000495940 NKX2-4Q9H2Z4 354 aa16.07■□□□□ 0.16
TFE3-205ENST00000495940 SNRKQ9NRH2 765 aa16.07■□□□□ 0.16
TFE3-205ENST00000495940 TBX21Q9UL17 535 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms