RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 SLC1A4P43007 532 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 CD99L2Q8TCZ2 262 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 DCAF4Q8WV16 495 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 NUP88Q99567 741 aaPredicted RBP23.54■■□□□ 1.36
LMO4-204ENST00000495705 MTA3Q9BTC8 594 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 KAT14Q9H8E8 782 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 RABGAP1Q9Y3P9 1069 aa23.54■■□□□ 1.36
LMO4-204ENST00000495705 IFIT1BQ5T764 474 aaKnown RBP23.53■■□□□ 1.36
LMO4-204ENST00000495705 MB21D1Q8N884 522 aa23.53■■□□□ 1.36
LMO4-204ENST00000495705 KCNB2Q92953 911 aa23.53■■□□□ 1.36
LMO4-204ENST00000495705 RBPJLQ9UBG7 517 aa23.53■■□□□ 1.36
LMO4-204ENST00000495705 FEM1BQ9UK73 627 aa23.53■■□□□ 1.36
LMO4-204ENST00000495705 PPP1R9AQ9ULJ8 1098 aa23.53■■□□□ 1.36
LMO4-204ENST00000495705 MCCP23508 829 aa23.52■■□□□ 1.36
LMO4-204ENST00000495705 MCM5P33992 734 aa23.52■■□□□ 1.36
LMO4-204ENST00000495705 SEC23AQ15436 765 aa23.52■■□□□ 1.36
LMO4-204ENST00000495705 CTU1Q7Z7A3 348 aaKnown RBP23.52■■□□□ 1.36
LMO4-204ENST00000495705 GPRC5AQ8NFJ5 357 aa23.52■■□□□ 1.36
LMO4-204ENST00000495705 SLF1Q9BQI6 1058 aa23.52■■□□□ 1.36
LMO4-204ENST00000495705 PAGR1Q9BTK6 254 aa23.52■■□□□ 1.36
LMO4-204ENST00000495705 IFIT3O14879 490 aaKnown RBP23.51■■□□□ 1.35
LMO4-204ENST00000495705 GNRH1P01148 92 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 ANTXR2P58335 489 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 ERVK-9P63128 1117 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 ERVK-24P63145 666 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 RASEFQ8IZ41 740 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 PNMA1Q8ND90 353 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 ATG4CQ96DT6 458 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 NEK1Q96PY6 1258 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 USP26Q9BXU7 913 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 TXNRD2Q9NNW7 524 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 FBXO28Q9NVF7 368 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 ISY1Q9ULR0 285 aaKnown RBP23.51■■□□□ 1.35
LMO4-204ENST00000495705 ZSWIM8A7E2V4 1837 aa23.51■■□□□ 1.35
LMO4-204ENST00000495705 PLA2G6O60733 806 aa23.5■■□□□ 1.35
LMO4-204ENST00000495705 STAT2P52630 851 aa23.5■■□□□ 1.35
LMO4-204ENST00000495705 FCGRTP55899 365 aa23.5■■□□□ 1.35
LMO4-204ENST00000495705 CCDC96Q2M329 555 aa23.5■■□□□ 1.35
LMO4-204ENST00000495705 FAM160B2Q86V87 743 aa23.5■■□□□ 1.35
LMO4-204ENST00000495705 PRPF38AQ8NAV1 312 aaKnown RBP23.5■■□□□ 1.35
LMO4-204ENST00000495705 TMEM87BQ96K49 555 aa23.5■■□□□ 1.35
LMO4-204ENST00000495705 EFCC1Q9HA90 598 aa23.5■■□□□ 1.35
LMO4-204ENST00000495705 ADAMTS5Q9UNA0 930 aa23.5■■□□□ 1.35
LMO4-204ENST00000495705 MTMR7Q9Y216 660 aa23.5■■□□□ 1.35
LMO4-204ENST00000495705 COL11A1P12107 1806 aaPredicted RBP23.49■■□□□ 1.35
LMO4-204ENST00000495705 TMEM232C9JQI7 657 aa23.49■■□□□ 1.35
LMO4-204ENST00000495705 PRC1O43663 620 aa23.49■■□□□ 1.35
LMO4-204ENST00000495705 SNHG28P0DPA3 235 aa23.49■■□□□ 1.35
LMO4-204ENST00000495705 PDHBP11177 359 aa23.49■■□□□ 1.35
LMO4-204ENST00000495705 PSMC4P43686 418 aa23.49■■□□□ 1.35
LMO4-204ENST00000495705 CCNA1P78396 465 aa23.49■■□□□ 1.35
LMO4-204ENST00000495705 WTAPQ15007 396 aa23.49■■□□□ 1.35
LMO4-204ENST00000495705 POTEEQ6S8J3 1075 aa23.49■■□□□ 1.35
LMO4-204ENST00000495705 SAMD1Q6SPF0 538 aaPredicted RBP23.49■■□□□ 1.35
LMO4-204ENST00000495705 CHURC1Q8WUH1 139 aa23.49■■□□□ 1.35
LMO4-204ENST00000495705 VWA5AO00534 786 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 CNMDO75829 334 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 HMGB1P09429 215 aaKnown RBP23.48■■□□□ 1.35
LMO4-204ENST00000495705 FDX1P10109 184 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 IKQ13123 557 aaPredicted RBP23.48■■□□□ 1.35
LMO4-204ENST00000495705 PKN2Q16513 984 aaKnown RBP23.48■■□□□ 1.35
LMO4-204ENST00000495705 TMEM67Q5HYA8 995 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 COL13A1Q5TAT6 717 aaPredicted RBP23.48■■□□□ 1.35
LMO4-204ENST00000495705 KCTD1Q719H9 257 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 CHST3Q7LGC8 479 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 OTOP1Q7RTM1 612 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 ARHGAP39Q9C0H5 1083 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 BTBD7Q9P203 1132 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 TRIM17Q9Y577 477 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 SNX14Q9Y5W7 946 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 WDR19Q8NEZ3 1342 aa23.48■■□□□ 1.35
LMO4-204ENST00000495705 FMNL1O95466 1100 aaPredicted RBP23.47■■□□□ 1.35
LMO4-204ENST00000495705 ADCK5Q3MIX3 580 aa23.47■■□□□ 1.35
LMO4-204ENST00000495705 GPATCH4Q5T3I0 446 aaKnown RBP23.47■■□□□ 1.35
LMO4-204ENST00000495705 RASGRP2Q7LDG7 609 aa23.47■■□□□ 1.35
LMO4-204ENST00000495705 IGDCC4Q8TDY8 1250 aa23.47■■□□□ 1.35
LMO4-204ENST00000495705 KIFC2Q96AC6 838 aa23.47■■□□□ 1.35
LMO4-204ENST00000495705 TRIM47Q96LD4 638 aa23.47■■□□□ 1.35
LMO4-204ENST00000495705 HOXD10P28358 340 aa23.46■■□□□ 1.35
LMO4-204ENST00000495705 CTGFP29279 349 aa23.46■■□□□ 1.35
LMO4-204ENST00000495705 MAPK4P31152 587 aa23.46■■□□□ 1.35
LMO4-204ENST00000495705 PRMT2P55345 433 aa23.46■■□□□ 1.35
LMO4-204ENST00000495705 ZNF543Q08ER8 600 aa23.46■■□□□ 1.35
LMO4-204ENST00000495705 Q3C1V9 767 aa23.46■■□□□ 1.35
LMO4-204ENST00000495705 CCAR1Q8IX12 1150 aaKnown RBP23.46■■□□□ 1.35
LMO4-204ENST00000495705 TMTC2Q8N394 836 aa23.46■■□□□ 1.35
LMO4-204ENST00000495705 CHMP4CQ96CF2 233 aa23.46■■□□□ 1.35
LMO4-204ENST00000495705 SH2B2O14492 632 aaPredicted RBP23.45■■□□□ 1.34
LMO4-204ENST00000495705 TNPO2O14787 897 aaKnown RBP23.45■■□□□ 1.34
LMO4-204ENST00000495705 PEX10O60683 326 aa23.45■■□□□ 1.34
LMO4-204ENST00000495705 PSMA5P28066 241 aa23.45■■□□□ 1.34
LMO4-204ENST00000495705 CAP1Q01518 475 aa23.45■■□□□ 1.34
LMO4-204ENST00000495705 BTNL9Q6UXG8 535 aa23.45■■□□□ 1.34
LMO4-204ENST00000495705 DHX32Q7L7V1 743 aaKnown RBP23.45■■□□□ 1.34
LMO4-204ENST00000495705 COA7Q96BR5 231 aa23.45■■□□□ 1.34
LMO4-204ENST00000495705 SPATC1LQ9H0A9 340 aa23.45■■□□□ 1.34
LMO4-204ENST00000495705 CTDP1Q9Y5B0 961 aaPredicted RBP23.45■■□□□ 1.34
LMO4-204ENST00000495705 FRMPD2Q68DX3 1309 aaPredicted RBP23.44■■□□□ 1.34
LMO4-204ENST00000495705 ZBED4O75132 1171 aa23.44■■□□□ 1.34
LMO4-204ENST00000495705 ECM2O94769 699 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms