RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 UBE2Q1Q7Z7E8 422 aa20.54■□□□□ 0.88
CTNS-207ENST00000495445 TRMT44Q8IYL2 757 aaKnown RBP20.54■□□□□ 0.88
CTNS-207ENST00000495445 TRIB2Q92519 343 aa20.54■□□□□ 0.88
CTNS-207ENST00000495445 FBXO28Q9NVF7 368 aa20.54■□□□□ 0.88
CTNS-207ENST00000495445 PARP14Q460N5 1801 aa20.54■□□□□ 0.88
CTNS-207ENST00000495445 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 A0A0G2JMZ2 1700 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 ORC4O43929 436 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 IGHA2P01877 340 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 HOXC6P09630 235 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 TSPY3P0CV98 308 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 TSPY8P0CW00 308 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 RGS2P41220 211 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 NOVP48745 357 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 TRIM32Q13049 653 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 MAP2K5Q13163 448 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 GRB14Q14449 540 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 FAM83BQ5T0W9 1011 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 MAP3K21Q5TCX8 1036 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 IL17RBQ9NRM6 502 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 PPP1R9AQ9ULJ8 1098 aa20.53■□□□□ 0.88
CTNS-207ENST00000495445 STRNO43815 780 aa20.52■□□□□ 0.88
CTNS-207ENST00000495445 NDUFB10O96000 172 aa20.52■□□□□ 0.88
CTNS-207ENST00000495445 MFAP1P55081 439 aaKnown RBP20.52■□□□□ 0.88
CTNS-207ENST00000495445 TMEM132BQ14DG7 1078 aa20.52■□□□□ 0.88
CTNS-207ENST00000495445 GMCL1P1Q8NEA9 526 aa20.52■□□□□ 0.88
CTNS-207ENST00000495445 REPS2Q8NFH8 660 aa20.52■□□□□ 0.88
CTNS-207ENST00000495445 U2AF1L4Q8WU68 220 aaKnown RBP20.52■□□□□ 0.88
CTNS-207ENST00000495445 CRISPLD2Q9H0B8 497 aa20.52■□□□□ 0.88
CTNS-207ENST00000495445 RPTORQ8N122 1335 aa20.52■□□□□ 0.87
CTNS-207ENST00000495445 HIP1O00291 1037 aa20.51■□□□□ 0.87
CTNS-207ENST00000495445 VWA5AO00534 786 aa20.51■□□□□ 0.87
CTNS-207ENST00000495445 ERCC3P19447 782 aa20.51■□□□□ 0.87
CTNS-207ENST00000495445 GSPT1P15170 499 aaKnown RBP20.5■□□□□ 0.87
CTNS-207ENST00000495445 CCL14Q16627 93 aa20.5■□□□□ 0.87
CTNS-207ENST00000495445 TTC22Q5TAA0 569 aa20.5■□□□□ 0.87
CTNS-207ENST00000495445 CWC27Q6UX04 472 aaKnown RBP20.5■□□□□ 0.87
CTNS-207ENST00000495445 ABRAQ8N0Z2 381 aa20.5■□□□□ 0.87
CTNS-207ENST00000495445 NUP88Q99567 741 aaPredicted RBP20.5■□□□□ 0.87
CTNS-207ENST00000495445 APBA2Q99767 749 aa20.5■□□□□ 0.87
CTNS-207ENST00000495445 MROH8Q9H579 483 aa20.5■□□□□ 0.87
CTNS-207ENST00000495445 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
CTNS-207ENST00000495445 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
CTNS-207ENST00000495445 RIOX2Q8IUF8 465 aa20.49■□□□□ 0.87
CTNS-207ENST00000495445 PRPF38AQ8NAV1 312 aaKnown RBP20.49■□□□□ 0.87
CTNS-207ENST00000495445 DEFB118Q96PH6 123 aa20.49■□□□□ 0.87
CTNS-207ENST00000495445 NBPF3Q9H094 633 aa20.49■□□□□ 0.87
CTNS-207ENST00000495445 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.49■□□□□ 0.87
CTNS-207ENST00000495445 HMX1Q9NP08 348 aaPredicted RBP20.49■□□□□ 0.87
CTNS-207ENST00000495445 ZNF214Q9UL59 606 aaPredicted RBP20.49■□□□□ 0.87
CTNS-207ENST00000495445 IVNS1ABPQ9Y6Y0 642 aa20.49■□□□□ 0.87
CTNS-207ENST00000495445 TSPY2A6NKD2 308 aa20.48■□□□□ 0.87
CTNS-207ENST00000495445 SLC25A27O95847 323 aa20.48■□□□□ 0.87
CTNS-207ENST00000495445 CACNB2Q08289 660 aaPredicted RBP20.48■□□□□ 0.87
CTNS-207ENST00000495445 WDR78Q5VTH9 848 aa20.48■□□□□ 0.87
CTNS-207ENST00000495445 NPLOC4Q8TAT6 608 aa20.48■□□□□ 0.87
CTNS-207ENST00000495445 SLF1Q9BQI6 1058 aa20.48■□□□□ 0.87
CTNS-207ENST00000495445 CWC22Q9HCG8 908 aaKnown RBP20.48■□□□□ 0.87
CTNS-207ENST00000495445 DIAPH3Q9NSV4 1193 aa20.48■□□□□ 0.87
CTNS-207ENST00000495445 TCP11L1Q9NUJ3 509 aa20.48■□□□□ 0.87
CTNS-207ENST00000495445 FLRT1Q9NZU1 646 aa20.48■□□□□ 0.87
CTNS-207ENST00000495445 ATP2A1O14983 1001 aa20.47■□□□□ 0.87
CTNS-207ENST00000495445 RAD21O60216 631 aa20.47■□□□□ 0.87
CTNS-207ENST00000495445 RANBP6O60518 1105 aaKnown RBP20.47■□□□□ 0.87
CTNS-207ENST00000495445 NMT2O60551 498 aa20.47■□□□□ 0.87
CTNS-207ENST00000495445 PCP11498 1178 aaKnown RBP20.47■□□□□ 0.87
CTNS-207ENST00000495445 PRKAR2AP13861 404 aaKnown RBP20.47■□□□□ 0.87
CTNS-207ENST00000495445 ZKSCAN1P17029 563 aaPredicted RBP20.47■□□□□ 0.87
CTNS-207ENST00000495445 STAT3P40763 770 aa20.47■□□□□ 0.87
CTNS-207ENST00000495445 PLS1Q14651 629 aa20.47■□□□□ 0.87
CTNS-207ENST00000495445 SLFN13Q68D06 897 aa20.47■□□□□ 0.87
CTNS-207ENST00000495445 LRRC47Q8N1G4 583 aaKnown RBP20.47■□□□□ 0.87
CTNS-207ENST00000495445 DSCC1Q9BVC3 393 aa20.47■□□□□ 0.87
CTNS-207ENST00000495445 FEM1BQ9UK73 627 aa20.47■□□□□ 0.87
CTNS-207ENST00000495445 COL11A1P12107 1806 aaPredicted RBP20.46■□□□□ 0.87
CTNS-207ENST00000495445 COBLO75128 1261 aa20.46■□□□□ 0.87
CTNS-207ENST00000495445 TFRCP02786 760 aaKnown RBP20.46■□□□□ 0.87
CTNS-207ENST00000495445 ADORA2AP29274 412 aa20.46■□□□□ 0.87
CTNS-207ENST00000495445 AKNAD1Q5T1N1 836 aa20.46■□□□□ 0.87
CTNS-207ENST00000495445 PRPF38BQ5VTL8 546 aaKnown RBP20.46■□□□□ 0.87
CTNS-207ENST00000495445 NCAPG2Q86XI2 1143 aa20.46■□□□□ 0.87
CTNS-207ENST00000495445 STAG1Q8WVM7 1258 aa20.46■□□□□ 0.87
CTNS-207ENST00000495445 GMCL1Q96IK5 515 aa20.46■□□□□ 0.87
CTNS-207ENST00000495445 PLA2G6O60733 806 aa20.45■□□□□ 0.86
CTNS-207ENST00000495445 BMP3P12645 472 aa20.45■□□□□ 0.86
CTNS-207ENST00000495445 HAND2P61296 217 aa20.45■□□□□ 0.86
CTNS-207ENST00000495445 OLFML2BQ68BL8 750 aa20.45■□□□□ 0.86
CTNS-207ENST00000495445 SAMD1Q6SPF0 538 aaPredicted RBP20.45■□□□□ 0.86
CTNS-207ENST00000495445 IL25Q9H293 177 aa20.45■□□□□ 0.86
CTNS-207ENST00000495445 SLC38A10Q9HBR0 1119 aa20.45■□□□□ 0.86
CTNS-207ENST00000495445 ZNF236Q9UL36 1845 aa20.45■□□□□ 0.86
CTNS-207ENST00000495445 LHX8Q68G74 356 aa20.44■□□□□ 0.86
CTNS-207ENST00000495445 MFSD6Q6ZSS7 791 aa20.44■□□□□ 0.86
CTNS-207ENST00000495445 DPP9Q86TI2 863 aa20.44■□□□□ 0.86
CTNS-207ENST00000495445 TBC1D10CQ8IV04 446 aa20.44■□□□□ 0.86
CTNS-207ENST00000495445 OGDHLQ9ULD0 1010 aa20.44■□□□□ 0.86
CTNS-207ENST00000495445 STX8Q9UNK0 236 aa20.44■□□□□ 0.86
CTNS-207ENST00000495445 ZNFX1Q9P2E3 1918 aaKnown RBP20.43■□□□□ 0.86
CTNS-207ENST00000495445 ZNF213O14771 459 aa20.43■□□□□ 0.86
CTNS-207ENST00000495445 FCER1AP12319 257 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms