RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ZNF654Q8IZM8 581 aa18.82■□□□□ 0.6
CBX4-204ENST00000495122 HOOK2Q96ED9 719 aa18.82■□□□□ 0.6
CBX4-204ENST00000495122 TSPY26PQ9H489 355 aa18.82■□□□□ 0.6
CBX4-204ENST00000495122 SNCAIPQ9Y6H5 919 aa18.82■□□□□ 0.6
CBX4-204ENST00000495122 DDX60LQ5H9U9 1706 aaKnown RBP18.81■□□□□ 0.6
CBX4-204ENST00000495122 SYCE3A1L190 88 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 SPDYE5A6NIY4 337 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 YEATS4O95619 227 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 ADD1P35611 737 aaKnown RBP18.81■□□□□ 0.6
CBX4-204ENST00000495122 USP5P45974 858 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 CRHR2Q13324 411 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 C12orf60Q5U649 245 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 CATIPQ7Z7H3 387 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 FAM151AQ8WW52 585 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 WRNIP1Q96S55 665 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 ALG1Q9BT22 464 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 FAM217BQ9NTX9 383 aaPredicted RBP18.81■□□□□ 0.6
CBX4-204ENST00000495122 POLR3EQ9NVU0 708 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 RTEL1Q9NZ71 1219 aa18.81■□□□□ 0.6
CBX4-204ENST00000495122 DEXIO95424 95 aa18.8■□□□□ 0.6
CBX4-204ENST00000495122 CDC27P30260 824 aa18.8■□□□□ 0.6
CBX4-204ENST00000495122 NASPP49321 788 aaPredicted RBP18.8■□□□□ 0.6
CBX4-204ENST00000495122 DCAF15Q66K64 600 aa18.8■□□□□ 0.6
CBX4-204ENST00000495122 OTUD7BQ6GQQ9 843 aa18.8■□□□□ 0.6
CBX4-204ENST00000495122 FBXO46Q6PJ61 603 aaPredicted RBP18.8■□□□□ 0.6
CBX4-204ENST00000495122 FANCBQ8NB91 859 aa18.8■□□□□ 0.6
CBX4-204ENST00000495122 BRI3BPQ8WY22 251 aa18.8■□□□□ 0.6
CBX4-204ENST00000495122 OTUD5Q96G74 571 aa18.8■□□□□ 0.6
CBX4-204ENST00000495122 RNF26Q9BY78 433 aaPredicted RBP18.8■□□□□ 0.6
CBX4-204ENST00000495122 TAOK2Q9UL54 1235 aa18.8■□□□□ 0.6
CBX4-204ENST00000495122 LOC285556D6RIA3 1793 aa18.8■□□□□ 0.6
CBX4-204ENST00000495122 SOX10P56693 466 aa18.79■□□□□ 0.6
CBX4-204ENST00000495122 NFIAQ12857 509 aa18.79■□□□□ 0.6
CBX4-204ENST00000495122 IFIT1BQ5T764 474 aaKnown RBP18.79■□□□□ 0.6
CBX4-204ENST00000495122 ENAHQ8N8S7 591 aaPredicted RBP18.79■□□□□ 0.6
CBX4-204ENST00000495122 KCNG4Q8TDN1 519 aa18.79■□□□□ 0.6
CBX4-204ENST00000495122 ANKS1AQ92625 1134 aa18.79■□□□□ 0.6
CBX4-204ENST00000495122 ZNF341Q9BYN7 854 aa18.79■□□□□ 0.6
CBX4-204ENST00000495122 TCP11L1Q9NUJ3 509 aa18.79■□□□□ 0.6
CBX4-204ENST00000495122 FAM198AQ9UFP1 575 aa18.79■□□□□ 0.6
CBX4-204ENST00000495122 CCL15-CCL14A0A0B4J2E2 113 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 RANBP6O60518 1105 aaKnown RBP18.78■□□□□ 0.6
CBX4-204ENST00000495122 GTF2A2P52657 109 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 CCDC173Q0VFZ6 552 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 TCP10Q12799 353 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 CCL15Q16663 113 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 UVSSAQ2YD98 709 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 NKX2-3Q8TAU0 364 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 ZKSCAN4Q969J2 545 aaPredicted RBP18.78■□□□□ 0.6
CBX4-204ENST00000495122 SENP2Q9HC62 589 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 INCENPQ9NQS7 918 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 MCM9Q9NXL9 1143 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 ATRNL1Q5VV63 1379 aa18.78■□□□□ 0.6
CBX4-204ENST00000495122 A0A1W2PQ27 194 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 A0A1W2PQ64 194 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 A0A1W2PQD8 194 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 CTAGE5O15320 804 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 XBP1P17861 261 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 U2AF2P26368 475 aaKnown RBP eCLIP18.77■□□□□ 0.67e-10■■□□□ 13.4
CBX4-204ENST00000495122 BTDP43251 543 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 SAFBQ15424 915 aaKnown RBP eCLIP18.77■□□□□ 0.6
CBX4-204ENST00000495122 MYSM1Q5VVJ2 828 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 KRT40Q6A162 431 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 FAM173BQ6P4H8 233 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 DGKHQ86XP1 1220 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 ERO1BQ86YB8 467 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 FAM177A1Q8N128 213 aaPredicted RBP18.77■□□□□ 0.6
CBX4-204ENST00000495122 CRACR2BQ8N4Y2 399 aaPredicted RBP18.77■□□□□ 0.6
CBX4-204ENST00000495122 NUP62CLQ9H1M0 184 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 USP40Q9NVE5 1235 aa18.77■□□□□ 0.6
CBX4-204ENST00000495122 TFIP11Q9UBB9 837 aaKnown RBP18.77■□□□□ 0.6
CBX4-204ENST00000495122 PPIL2Q13356 520 aa18.76■□□□□ 0.59
CBX4-204ENST00000495122 MIGA2Q7L4E1 593 aa18.76■□□□□ 0.59
CBX4-204ENST00000495122 OTOP1Q7RTM1 612 aa18.76■□□□□ 0.59
CBX4-204ENST00000495122 SH3RF3Q8TEJ3 882 aaPredicted RBP18.76■□□□□ 0.59
CBX4-204ENST00000495122 ERO1AQ96HE7 468 aa18.76■□□□□ 0.59
CBX4-204ENST00000495122 USP28Q96RU2 1077 aa18.76■□□□□ 0.59
CBX4-204ENST00000495122 ZNF112Q9UJU3 913 aa18.76■□□□□ 0.59
CBX4-204ENST00000495122 MYH8P13535 1937 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 DTNBO60941 627 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 INPP5BP32019 993 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 KIF5BP33176 963 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 AKAP17AQ02040 695 aaKnown RBP18.75■□□□□ 0.59
CBX4-204ENST00000495122 RBM43Q6ZSC3 357 aaKnown RBP18.75■□□□□ 0.59
CBX4-204ENST00000495122 NBPF11Q86T75 865 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 FAM43AQ8N2R8 423 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 CD99L2Q8TCZ2 262 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 BICD2Q8TD16 824 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 IDI2Q9BXS1 227 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 SLC26A6Q9BXS9 759 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 CLSTN2Q9H4D0 955 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 TRIM17Q9Y577 477 aa18.75■□□□□ 0.59
CBX4-204ENST00000495122 MORC2Q9Y6X9 1032 aaPredicted RBP18.75■□□□□ 0.59
CBX4-204ENST00000495122 KIAA0100Q14667 2235 aaKnown RBP18.75■□□□□ 0.59
CBX4-204ENST00000495122 DOCK3Q8IZD9 2030 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 CYP2D7A0A087X1C5 515 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 TSPY2A6NKD2 308 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 IRF6O14896 467 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 PRPF3O43395 683 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms