RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
PRPF4B-209ENST00000494674 SRPRBQ9Y5M8 271 aaKnown RBP12.19□□□□□ -0.46
PRPF4B-209ENST00000494674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 DDTLA6NHG4 134 aaPredicted RBP12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 USP17L5A8MUK1 530 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 PARP1P09874 1014 aaKnown RBP12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 PDHBP11177 359 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 SMARCA1P28370 1054 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 NLRP5P59047 1200 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 GRIPAP1Q4V328 841 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 CCDC93Q567U6 631 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 DAGLBQ8NCG7 672 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 KCNH3Q9ULD8 1083 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 CEP131Q9UPN4 1083 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 MTMR7Q9Y216 660 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 ATRNL1Q5VV63 1379 aa12.18□□□□□ -0.46
PRPF4B-209ENST00000494674 ATP2B1P20020 1258 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 CALML3P27482 149 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 SPECC1Q5M775 1068 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 TTC38Q5R3I4 469 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 USP49Q70CQ1 688 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 METTL16Q86W50 562 aaKnown RBP12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 BLIDQ8IZY5 108 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 FAM177A1Q8N128 213 aaPredicted RBP12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 LRRC47Q8N1G4 583 aaKnown RBP12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 GMLQ99445 158 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 ANO10Q9NW15 660 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 TUBE1Q9UJT0 475 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 PCDHA4Q9UN74 947 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 HLA-DOAP06340 250 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 ATP2C1P98194 919 aaPredicted RBP12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 DPCR1Q3MIW9 517 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 LONRF3Q496Y0 759 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 KRBA2Q6ZNG9 492 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 PIK3AP1Q6ZUJ8 805 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 ZSCAN30Q86W11 494 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 DHX40Q8IX18 779 aaKnown RBP12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 RTKN2Q8IZC4 609 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 CSRNP2Q9H175 543 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 NOL7Q9UMY1 257 aaKnown RBP12.17□□□□□ -0.46
PRPF4B-209ENST00000494674 TTLL1O95922 423 aa12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 BMP15O95972 392 aa12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 TCP10Q12799 353 aa12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 HEATR3Q7Z4Q2 680 aa12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 ELOA2Q8IYF1 753 aaPredicted RBP12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 RASGRP4Q8TDF6 673 aa12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 DHX36Q9H2U1 1008 aaKnown RBP12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 CCDC39Q9UFE4 941 aa12.16□□□□□ -0.46
PRPF4B-209ENST00000494674 A0A087X0B3 334 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 FAM196BA6NMK8 535 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 EIF6P56537 245 aaKnown RBP12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 ZNF174Q15697 407 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 CFAP100Q494V2 611 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 ASPRV1Q53RT3 343 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 GALNT17Q6IS24 598 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 TATDN1Q6P1N9 297 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 FOXP4Q8IVH2 680 aaPredicted RBP12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 C4orf32Q8N8J7 132 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 CCDC148Q8NFR7 591 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 FERMT2Q96AC1 680 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 PRMT6Q96LA8 375 aaPredicted RBP12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 ZMYND12Q9H0C1 365 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 TDRD3Q9H7E2 651 aaKnown RBP12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 ZNF277Q9NRM2 450 aaPredicted RBP12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 PCDHA6Q9UN73 950 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 PCDHA8Q9Y5H6 950 aa12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 FRMPD2Q68DX3 1309 aaPredicted RBP12.15□□□□□ -0.46
PRPF4B-209ENST00000494674 FOXN1O15353 648 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 ACTN4O43707 911 aaKnown RBP12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 ENTPD3O75355 529 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 VIL1P09327 827 aaKnown RBP12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 CLCN1P35523 988 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 NLRP12P59046 1061 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 PTGDRQ13258 359 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 PNOCQ13519 176 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 IL17AQ16552 155 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 PLA2G4DQ86XP0 818 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 CEP57L1Q8IYX8 460 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 CCDC17Q96LX7 622 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 PIGSQ96S52 555 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 BPIFA3Q9BQP9 254 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 UBA5Q9GZZ9 404 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 PI4KBQ9UBF8 816 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 ZKSCAN5Q9Y2L8 839 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 PSMD14O00487 310 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 SARM1Q6SZW1 724 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 SIAH1Q8IUQ4 282 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 RRP36Q96EU6 259 aaKnown RBP12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 FAM13BQ9NYF5 915 aa12.14□□□□□ -0.47
PRPF4B-209ENST00000494674 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 ESYT2A0FGR8 921 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms