RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 C11orf57Q6ZUT1 292 aaPredicted RBP12.65□□□□□ -0.38
ZIC4-216ENST00000494569 PRDM16Q9HAZ2 1276 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 VPS54Q9P1Q0 977 aa12.65□□□□□ -0.38
ZIC4-216ENST00000494569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
ZIC4-216ENST00000494569 SCG2P13521 617 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 CDC42EP5Q6NZY7 148 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 STAG2Q8N3U4 1231 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 DAGLBQ8NCG7 672 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 SNHG28P0DPA3 235 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 METTL16Q86W50 562 aaKnown RBP12.64□□□□□ -0.39
ZIC4-216ENST00000494569 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
ZIC4-216ENST00000494569 SPATA20Q8TB22 786 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 ZNF830Q96NB3 372 aaPredicted RBP12.64□□□□□ -0.39
ZIC4-216ENST00000494569 EHD4Q9H223 541 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 CCDC39Q9UFE4 941 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 PCDHB6Q9Y5E3 794 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 WNT7AO00755 349 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 HSPA1AP0DMV8 641 aaKnown RBP12.64□□□□□ -0.39
ZIC4-216ENST00000494569 HSPA1BP0DMV9 641 aaKnown RBP12.64□□□□□ -0.39
ZIC4-216ENST00000494569 CHRNA5P30532 468 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 KRT2P35908 639 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 KIAA2012Q0VF49 1180 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 KAT14Q9H8E8 782 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 ZNF287Q9HBT7 754 aa12.64□□□□□ -0.39
ZIC4-216ENST00000494569 SRPRBQ9Y5M8 271 aaKnown RBP12.64□□□□□ -0.39
ZIC4-216ENST00000494569 FAM205CA6NFA0 338 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 ZNF202O95125 648 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 NCAPHQ15003 741 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 AMOTL1Q8IY63 956 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 CCDC82Q8N4S0 544 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 SPZ1Q9BXG8 430 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
ZIC4-216ENST00000494569 TTF2Q9UNY4 1162 aaKnown RBP12.63□□□□□ -0.39
ZIC4-216ENST00000494569 PARP14Q460N5 1801 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 TSPY3P0CV98 308 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 TSPY8P0CW00 308 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 KIF5BP33176 963 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 SAFBQ15424 915 aaKnown RBP eCLIP12.63□□□□□ -0.39
ZIC4-216ENST00000494569 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 FAM43BQ6ZT52 329 aaPredicted RBP12.63□□□□□ -0.39
ZIC4-216ENST00000494569 IDI2Q9BXS1 227 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 MKNK2Q9HBH9 465 aa12.63□□□□□ -0.39
ZIC4-216ENST00000494569 ECE2O60344 883 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 ADCY5O95622 1261 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 SHMT1P34896 483 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
ZIC4-216ENST00000494569 ZNF444Q8N0Y2 327 aaPredicted RBP12.62□□□□□ -0.39
ZIC4-216ENST00000494569 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 ATAD5Q96QE3 1844 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 KINO60870 393 aaKnown RBP12.62□□□□□ -0.39
ZIC4-216ENST00000494569 MARCKSP29966 332 aaPredicted RBP12.62□□□□□ -0.39
ZIC4-216ENST00000494569 CRKP46108 304 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 GRIN1Q05586 938 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 STX1AQ16623 288 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 TYW1BQ6NUM6 668 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 CLIC6Q96NY7 704 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 LZTS2Q9BRK4 669 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 hCG_1642624A0A1W2PR95 340 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 GRIPAP1Q4V328 841 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
ZIC4-216ENST00000494569 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
ZIC4-216ENST00000494569 KCND1Q9NSA2 647 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 SWAP70Q9UH65 585 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 LOC285556D6RIA3 1793 aa12.62□□□□□ -0.39
ZIC4-216ENST00000494569 ATRNL1Q5VV63 1379 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 SARSP49591 514 aaKnown RBP12.61□□□□□ -0.39
ZIC4-216ENST00000494569 GNAQP50148 359 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 C4orf32Q8N8J7 132 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 CEP95Q96GE4 821 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 DNAJC18Q9H819 358 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 YDJCA8MPS7 323 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 STXBP3O00186 592 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 TOP1P11387 765 aaKnown RBP12.61□□□□□ -0.39
ZIC4-216ENST00000494569 XBP1P17861 261 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 SASS6Q6UVJ0 657 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 LUZP1Q86V48 1076 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
ZIC4-216ENST00000494569 TEKT1Q969V4 418 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 DNAJC25Q9H1X3 360 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 DBNDD1Q9H9R9 158 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 USP40Q9NVE5 1235 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 MTMR4Q9NYA4 1195 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 SERPINA10Q9UK55 444 aa12.61□□□□□ -0.39
ZIC4-216ENST00000494569 TRAPPC10P48553 1259 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 TERF1P54274 439 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 FOXP4Q8IVH2 680 aaPredicted RBP12.6□□□□□ -0.39
ZIC4-216ENST00000494569 C17orf53Q8N3J3 647 aaPredicted RBP12.6□□□□□ -0.39
ZIC4-216ENST00000494569 CABP5Q9NP86 173 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 FAM198AQ9UFP1 575 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 BMP6P22004 513 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.6□□□□□ -0.39
ZIC4-216ENST00000494569 RIOX1Q9H6W3 641 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 WWC2Q6AWC2 1192 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 RASGRP2Q7LDG7 609 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 PSMD1Q99460 953 aa12.6□□□□□ -0.39
ZIC4-216ENST00000494569 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms