RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SLC15A5A6NIM6 579 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 PTPREP23469 700 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 MAP2K5Q13163 448 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 GRB14Q14449 540 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 MAP3K21Q5TCX8 1036 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 MKL1Q969V6 931 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 ATG4CQ96DT6 458 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 MOV10L1Q9BXT6 1211 aaKnown RBP15.66■□□□□ 0.1
ERCC3-209ENST00000494464 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.66■□□□□ 0.1
ERCC3-209ENST00000494464 MTMR4Q9NYA4 1195 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 ADAMTS5Q9UNA0 930 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 IVNS1ABPQ9Y6Y0 642 aa15.66■□□□□ 0.1
ERCC3-209ENST00000494464 SGPL1O95470 568 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 TTLL1O95922 423 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 HOXC6P09630 235 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 TSPY3P0CV98 308 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 TSPY8P0CW00 308 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 ZKSCAN1P17029 563 aaPredicted RBP15.65■□□□□ 0.1
ERCC3-209ENST00000494464 SDSP20132 328 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 MFAP1P55081 439 aaKnown RBP15.65■□□□□ 0.1
ERCC3-209ENST00000494464 UBE2Q1Q7Z7E8 422 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 ZNF589Q86UQ0 364 aaPredicted RBP15.65■□□□□ 0.1
ERCC3-209ENST00000494464 PPP1R9AQ9ULJ8 1098 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 FRMPD3Q5JV73 1810 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 RPTORQ8N122 1335 aa15.65■□□□□ 0.1
ERCC3-209ENST00000494464 F5H6K3 240 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 NDUFB10O96000 172 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 FGRP09769 529 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 HSPD1P10809 573 aaKnown RBP15.64■□□□□ 0.09
ERCC3-209ENST00000494464 KLRC3Q07444 240 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 PPP4R3BQ5MIZ7 849 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 FAM83BQ5T0W9 1011 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 WDR78Q5VTH9 848 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 GMCL1P1Q8NEA9 526 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 DEFB118Q96PH6 123 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 CRISPLD2Q9H0B8 497 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 MROH8Q9H579 483 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 HMX1Q9NP08 348 aaPredicted RBP15.64■□□□□ 0.09
ERCC3-209ENST00000494464 FBXO28Q9NVF7 368 aa15.64■□□□□ 0.09
ERCC3-209ENST00000494464 HIP1O00291 1037 aa15.63■□□□□ 0.09
ERCC3-209ENST00000494464 STRNO43815 780 aa15.63■□□□□ 0.09
ERCC3-209ENST00000494464 ORC4O43929 436 aa15.63■□□□□ 0.09
ERCC3-209ENST00000494464 FGAP02671 866 aa15.63■□□□□ 0.09
ERCC3-209ENST00000494464 PRKAR2AP13861 404 aaKnown RBP15.63■□□□□ 0.09
ERCC3-209ENST00000494464 TFAP4Q01664 338 aa15.63■□□□□ 0.09
ERCC3-209ENST00000494464 CTDSPL2Q05D32 466 aa15.63■□□□□ 0.09
ERCC3-209ENST00000494464 TRIM32Q13049 653 aa15.63■□□□□ 0.09
ERCC3-209ENST00000494464 TMEM132BQ14DG7 1078 aa15.63■□□□□ 0.09
ERCC3-209ENST00000494464 CLIP2Q9UDT6 1046 aa15.63■□□□□ 0.09
ERCC3-209ENST00000494464 VWA5AO00534 786 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 RAD21O60216 631 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 ERCC3P19447 782 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 PDE4AP27815 886 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 CCL14Q16627 93 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 FAM47AQ5JRC9 791 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 SKAP1Q86WV1 359 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 ABRAQ8N0Z2 381 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 LRRC47Q8N1G4 583 aaKnown RBP15.62■□□□□ 0.09
ERCC3-209ENST00000494464 REPS2Q8NFH8 660 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 NUP88Q99567 741 aaPredicted RBP15.62■□□□□ 0.09
ERCC3-209ENST00000494464 SLF1Q9BQI6 1058 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 BACH2Q9BYV9 841 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 DIAPH3Q9NSV4 1193 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 ZNF214Q9UL59 606 aaPredicted RBP15.62■□□□□ 0.09
ERCC3-209ENST00000494464 TSPY2A6NKD2 308 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 FARP2O94887 1054 aaPredicted RBP15.62■□□□□ 0.09
ERCC3-209ENST00000494464 SLC25A27O95847 323 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 PCP11498 1178 aaKnown RBP15.62■□□□□ 0.09
ERCC3-209ENST00000494464 COPB2P35606 906 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 PLS1Q14651 629 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 RIOX2Q8IUF8 465 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 ANKLE1Q8NAG6 615 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 TACC3Q9Y6A5 838 aa15.62■□□□□ 0.09
ERCC3-209ENST00000494464 IGHA2P01877 340 aa15.61■□□□□ 0.09
ERCC3-209ENST00000494464 ADORA2AP29274 412 aa15.61■□□□□ 0.09
ERCC3-209ENST00000494464 NOVP48745 357 aa15.61■□□□□ 0.09
ERCC3-209ENST00000494464 CACNB2Q08289 660 aaPredicted RBP15.61■□□□□ 0.09
ERCC3-209ENST00000494464 TTC22Q5TAA0 569 aa15.61■□□□□ 0.09
ERCC3-209ENST00000494464 NCAPG2Q86XI2 1143 aa15.61■□□□□ 0.09
ERCC3-209ENST00000494464 PRPF38AQ8NAV1 312 aaKnown RBP15.61■□□□□ 0.09
ERCC3-209ENST00000494464 PLXNA1Q9UIW2 1896 aa15.6■□□□□ 0.09
ERCC3-209ENST00000494464 GSPT1P15170 499 aaKnown RBP15.6■□□□□ 0.09
ERCC3-209ENST00000494464 MFSD14CQ5VZR4 134 aa15.6■□□□□ 0.09
ERCC3-209ENST00000494464 OLFML2BQ68BL8 750 aa15.6■□□□□ 0.09
ERCC3-209ENST00000494464 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-209ENST00000494464 CWC27Q6UX04 472 aaKnown RBP15.6■□□□□ 0.09
ERCC3-209ENST00000494464 NPLOC4Q8TAT6 608 aa15.6■□□□□ 0.09
ERCC3-209ENST00000494464 GMCL1Q96IK5 515 aa15.6■□□□□ 0.09
ERCC3-209ENST00000494464 IL17RBQ9NRM6 502 aa15.6■□□□□ 0.09
ERCC3-209ENST00000494464 FLRT1Q9NZU1 646 aa15.6■□□□□ 0.09
ERCC3-209ENST00000494464 FEM1BQ9UK73 627 aa15.6■□□□□ 0.09
ERCC3-209ENST00000494464 STX8Q9UNK0 236 aa15.6■□□□□ 0.09
ERCC3-209ENST00000494464 ZNFX1Q9P2E3 1918 aaKnown RBP15.59■□□□□ 0.09
ERCC3-209ENST00000494464 ATP2A1O14983 1001 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 RANBP6O60518 1105 aaKnown RBP15.59■□□□□ 0.09
ERCC3-209ENST00000494464 TFRCP02786 760 aaKnown RBP15.59■□□□□ 0.09
ERCC3-209ENST00000494464 STAT3P40763 770 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 NT5C2P49902 561 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 SLFN13Q68D06 897 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 DPP9Q86TI2 863 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms