RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 ATP8A2Q9NTI2 1148 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 SAMM50Q9Y512 469 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 DCCP43146 1447 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 CBFA2T2O43439 604 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 CYP4A11Q02928 519 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 STIM1Q13586 685 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 LRRC41Q15345 812 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 KIF18AQ8NI77 898 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 PSMB7Q99436 277 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 KANSL2Q9H9L4 492 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 FAM217BQ9NTX9 383 aaPredicted RBP10.51□□□□□ -0.73
MINDY4-203ENST00000494187 DACH1Q9UI36 760 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 GDAQ9Y2T3 454 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 RIC1Q4ADV7 1423 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 CFBP00751 764 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 GYS1P13807 737 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 MATR3P43243 847 aaKnown RBP eCLIP10.51□□□□□ -0.73
MINDY4-203ENST00000494187 PDLIM2Q96JY6 352 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 C6orf50Q9HD87 102 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 SLIT3O75094 1523 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 UBXN1Q04323 297 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 RIOK1Q9BRS2 568 aaKnown RBP10.51□□□□□ -0.73
MINDY4-203ENST00000494187 SLC39A2Q9NP94 309 aa10.51□□□□□ -0.73
MINDY4-203ENST00000494187 PUF60Q9UHX1 559 aaKnown RBP10.51□□□□□ -0.73
MINDY4-203ENST00000494187 WNT7AO00755 349 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 IBSPP21815 317 aaPredicted RBP10.5□□□□□ -0.73
MINDY4-203ENST00000494187 PDE4DQ08499 809 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 NFIAQ12857 509 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 SHROOM1Q2M3G4 852 aaPredicted RBP10.5□□□□□ -0.73
MINDY4-203ENST00000494187 KIF4BQ2VIQ3 1234 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 LRRC8AQ8IWT6 810 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 TBC1D16Q8TBP0 767 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 SEPT11Q9NVA2 429 aaKnown RBP10.5□□□□□ -0.73
MINDY4-203ENST00000494187 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.5□□□□□ -0.73
MINDY4-203ENST00000494187 RGPD1P0DJD0 1748 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 AKR1B1P15121 316 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 TRIM21P19474 475 aaKnown RBP10.5□□□□□ -0.73
MINDY4-203ENST00000494187 HOXA13P31271 388 aaPredicted RBP10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 PRAMEF18Q5VWM3 479 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L6PQ6QN14 398 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 CCDC12Q8WUD4 166 aaPredicted RBP10.5□□□□□ -0.73
MINDY4-203ENST00000494187 TEKT1Q969V4 418 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 KIFC2Q96AC6 838 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 CALML4Q96GE6 196 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 RBM28Q9NW13 759 aaKnown RBP10.5□□□□□ -0.73
MINDY4-203ENST00000494187 TRIM49BA6NDI0 452 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 MYO1BO43795 1136 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 ATP2B4P23634 1241 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 CALML3P27482 149 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 FBXO33Q7Z6M2 555 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 METTL16Q86W50 562 aaKnown RBP10.5□□□□□ -0.73
MINDY4-203ENST00000494187 IGSF22Q8N9C0 903 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 EXOC1Q9NV70 894 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 MAN1B1Q9UKM7 699 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 LEMD3Q9Y2U8 911 aa10.5□□□□□ -0.73
MINDY4-203ENST00000494187 MEIS1O00470 390 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 IRX3P78415 501 aaPredicted RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 TDRD12Q587J7 1177 aaKnown RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 TMTC3Q6ZXV5 915 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 REXO1Q8N1G1 1221 aaKnown RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 CAGE1Q8TC20 777 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 CRACR2AQ9BSW2 395 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 RNF26Q9BY78 433 aaPredicted RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 FAM208AQ9UK61 1670 aaKnown RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 TOB1P50616 345 aaPredicted RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 CUL4BQ13620 913 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 NTRK3Q16288 839 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 TDRD7Q8NHU6 1098 aaKnown RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 TBCKQ8TEA7 893 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 SH2D3AQ9BRG2 576 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 ZNF277Q9NRM2 450 aaPredicted RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 BCS1LQ9Y276 419 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 POTEMA6NI47 508 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 U2AF2P26368 475 aaKnown RBP eCLIP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 AXDND1Q5T1B0 1012 aaPredicted RBP10.49□□□□□ -0.73
MINDY4-203ENST00000494187 KIAA1328Q86T90 577 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 CCDC148Q8NFR7 591 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 KIAA1524Q8TCG1 905 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 SERPINB13Q9UIV8 391 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 GUCA1BQ9UMX6 200 aa10.49□□□□□ -0.73
MINDY4-203ENST00000494187 PDE4DIPQ5VU43 2346 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 ADAMTS3O15072 1205 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 GNAQP50148 359 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 FAM193AP78312 1265 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 TMEM266Q2M3C6 531 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 BARGINQ6ZT62 677 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 SGMS1Q86VZ5 419 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 DHX40Q8IX18 779 aaKnown RBP10.48□□□□□ -0.73
MINDY4-203ENST00000494187 SNX29Q8TEQ0 813 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 ZNF384Q8TF68 577 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms