RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 MTMR4Q9NYA4 1195 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
CLCN6-208ENST00000494028 KIAA1468Q9P260 1216 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 FAM198AQ9UFP1 575 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 SERPINA10Q9UK55 444 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 MTMR7Q9Y216 660 aa12.21□□□□□ -0.45
CLCN6-208ENST00000494028 SRPRBQ9Y5M8 271 aaKnown RBP12.21□□□□□ -0.45
CLCN6-208ENST00000494028 KLRF2D3W0D1 207 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
CLCN6-208ENST00000494028 ZBTB7AO95365 584 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 PARP1P09874 1014 aaKnown RBP12.2□□□□□ -0.46
CLCN6-208ENST00000494028 ATP2B1P20020 1258 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 CLCN1P35523 988 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 PTGER2P43116 358 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 TRAPPC10P48553 1259 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 CACNB3P54284 484 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 ATP2C1P98194 919 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-208ENST00000494028 DPCR1Q3MIW9 517 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 USP17L2Q6R6M4 530 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 KRBA2Q6ZNG9 492 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 SH3BP5LQ7L8J4 393 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 ZFPM1Q8IX07 1006 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 PSMD1Q99460 953 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 SDF4Q9BRK5 362 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 CPVLQ9H3G5 476 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 BARHL2Q9NY43 387 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 TUBE1Q9UJT0 475 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 KCNH3Q9ULD8 1083 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 PCDHA4Q9UN74 947 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 ZKSCAN5Q9Y2L8 839 aa12.2□□□□□ -0.46
CLCN6-208ENST00000494028 FRMPD2Q68DX3 1309 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-208ENST00000494028 SLURP2P0DP57 97 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 DPEP1P16444 411 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 KCNA3P22001 575 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 GRIPAP1Q4V328 841 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 ASPRV1Q53RT3 343 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 SPECC1Q5M775 1068 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 PIK3AP1Q6ZUJ8 805 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 PLA2G4DQ86XP0 818 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 DHX40Q8IX18 779 aaKnown RBP12.19□□□□□ -0.46
CLCN6-208ENST00000494028 AOPEPQ8N6M6 819 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 TTLL6Q8N841 843 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 RASGRP4Q8TDF6 673 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 CSRNP2Q9H175 543 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 FAM13BQ9NYF5 915 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 MYH7BA7E2Y1 1941 aa12.19□□□□□ -0.46
CLCN6-208ENST00000494028 DDTLA6NHG4 134 aaPredicted RBP12.18□□□□□ -0.46
CLCN6-208ENST00000494028 FAM196BA6NMK8 535 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 USP17L5A8MUK1 530 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
CLCN6-208ENST00000494028 PTMAP06454 111 aaKnown RBP12.18□□□□□ -0.46
CLCN6-208ENST00000494028 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 SMARCA1P28370 1054 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 ZNF75DP51815 510 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 EIF6P56537 245 aaKnown RBP12.18□□□□□ -0.46
CLCN6-208ENST00000494028 NLRP12P59046 1061 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 CFAP100Q494V2 611 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 SARM1Q6SZW1 724 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 ELOA2Q8IYF1 753 aaPredicted RBP12.18□□□□□ -0.46
CLCN6-208ENST00000494028 FERMT2Q96AC1 680 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 BPIFA3Q9BQP9 254 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 RIOX1Q9H6W3 641 aa12.18□□□□□ -0.46
CLCN6-208ENST00000494028 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLCN6-208ENST00000494028 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
CLCN6-208ENST00000494028 A0A087X0B3 334 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 ESYT2A0FGR8 921 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 hCG_1984214I3L0E3 225 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 TTLL1O95922 423 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 ZNF543Q08ER8 600 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 PNOCQ13519 176 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 ZNF174Q15697 407 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 SHROOM1Q2M3G4 852 aaPredicted RBP12.17□□□□□ -0.46
CLCN6-208ENST00000494028 LONRF3Q496Y0 759 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 GALNT17Q6IS24 598 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 RSBN1LQ6PCB5 846 aaPredicted RBP12.17□□□□□ -0.46
CLCN6-208ENST00000494028 USP49Q70CQ1 688 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 RTKN2Q8IZC4 609 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 ZNF713Q8N859 430 aaPredicted RBP12.17□□□□□ -0.46
CLCN6-208ENST00000494028 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 RRP36Q96EU6 259 aaKnown RBP12.17□□□□□ -0.46
CLCN6-208ENST00000494028 CCDC17Q96LX7 622 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 MTFR1LQ9H019 292 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 DHX36Q9H2U1 1008 aaKnown RBP12.17□□□□□ -0.46
CLCN6-208ENST00000494028 PCDHA6Q9UN73 950 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 PCDHA8Q9Y5H6 950 aa12.17□□□□□ -0.46
CLCN6-208ENST00000494028 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 BIN1O00499 593 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 FOXN1O15353 648 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 ENTPD3O75355 529 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 CDC25BP30305 580 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 RBM5P52756 815 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLCN6-208ENST00000494028 NAPAP54920 295 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 TCP10Q12799 353 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 POSTNQ15063 836 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 PPP1R18Q6NYC8 613 aa12.16□□□□□ -0.46
CLCN6-208ENST00000494028 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.16□□□□□ -0.46
CLCN6-208ENST00000494028 HOMER1Q86YM7 354 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms