RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 RAB20Q9NX57 234 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 RGS12O14924 1447 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 CD19P15391 556 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 ZAP70P43403 619 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 SLFN12Q8IYM2 578 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 PDE6BP35913 854 aa22.15■■□□□ 1.14
RNF40-203ENST00000493683 SSH3Q8TE77 659 aa22.15■■□□□ 1.14
RNF40-203ENST00000493683 TRIM6Q9C030 488 aaPredicted RBP22.15■■□□□ 1.14
RNF40-203ENST00000493683 MYO1AQ9UBC5 1043 aa22.15■■□□□ 1.14
RNF40-203ENST00000493683 KRIT1O00522 736 aa22.15■■□□□ 1.14
RNF40-203ENST00000493683 IRX5P78411 483 aaPredicted RBP22.15■■□□□ 1.14
RNF40-203ENST00000493683 SPATA1Q5VX52 437 aa22.15■■□□□ 1.14
RNF40-203ENST00000493683 U2AF1L4Q8WU68 220 aaKnown RBP22.15■■□□□ 1.14
RNF40-203ENST00000493683 BLZF1Q9H2G9 400 aa22.15■■□□□ 1.14
RNF40-203ENST00000493683 ADKP55263 362 aaKnown RBP22.15■■□□□ 1.14
RNF40-203ENST00000493683 RSAD2Q8WXG1 361 aa22.15■■□□□ 1.14
RNF40-203ENST00000493683 CARD10Q9BWT7 1032 aa22.15■■□□□ 1.14
RNF40-203ENST00000493683 JAG2Q9Y219 1238 aa22.15■■□□□ 1.14
RNF40-203ENST00000493683 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.14
RNF40-203ENST00000493683 HIP1RO75146 1068 aa22.14■■□□□ 1.14
RNF40-203ENST00000493683 PALM2Q8IXS6 379 aa22.14■■□□□ 1.14
RNF40-203ENST00000493683 BLIDQ8IZY5 108 aa22.14■■□□□ 1.14
RNF40-203ENST00000493683 MYL10Q9BUA6 226 aa22.14■■□□□ 1.14
RNF40-203ENST00000493683 VPS54Q9P1Q0 977 aa22.14■■□□□ 1.14
RNF40-203ENST00000493683 BAIAP2L1Q9UHR4 511 aa22.14■■□□□ 1.14
RNF40-203ENST00000493683 HADHQ16836 314 aaKnown RBP22.14■■□□□ 1.13
RNF40-203ENST00000493683 NLRX1Q86UT6 975 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 Q9H521 79 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 A0A1W2PQ27 194 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 A0A1W2PQ64 194 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 A0A1W2PQD8 194 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 PRPF6O94906 941 aaKnown RBP22.14■■□□□ 1.13
RNF40-203ENST00000493683 TFAP4Q01664 338 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 CASC4Q6P4E1 433 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 LRRC8AQ8IWT6 810 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 GBP7Q8N8V2 638 aaPredicted RBP22.14■■□□□ 1.13
RNF40-203ENST00000493683 RILPQ96NA2 401 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 CAPS2Q9BXY5 557 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 SMCO2A6NFE2 343 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 MYCLP12524 364 aaPredicted RBP22.14■■□□□ 1.13
RNF40-203ENST00000493683 PSMB7Q99436 277 aa22.14■■□□□ 1.13
RNF40-203ENST00000493683 CLGNO14967 610 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 KLHDC4Q8TBB5 520 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 KRT12Q99456 494 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 NLRC4Q9NPP4 1024 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 CCDC87Q9NVE4 849 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 ZBTB9Q96C00 473 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 ARMCX3Q9UH62 379 aaPredicted RBP22.13■■□□□ 1.13
RNF40-203ENST00000493683 ZNF594Q96JF6 807 aaPredicted RBP22.13■■□□□ 1.13
RNF40-203ENST00000493683 PLXNC1O60486 1568 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 DDAH1O94760 285 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 MAP2K2P36507 400 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 HACE1Q8IYU2 909 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 TBC1D7Q9P0N9 293 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 RABGAP1Q9Y3P9 1069 aa22.13■■□□□ 1.13
RNF40-203ENST00000493683 EIF6P56537 245 aaKnown RBP22.12■■□□□ 1.13
RNF40-203ENST00000493683 CHURC1Q8WUH1 139 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 CUEDC2Q9H467 287 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 MTMR6Q9Y217 621 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 BZW2Q9Y6E2 419 aaKnown RBP22.12■■□□□ 1.13
RNF40-203ENST00000493683 KCNK3O14649 394 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 MAN1A1P33908 653 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 GBP5Q96PP8 586 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 ZSCAN10Q96SZ4 725 aaPredicted RBP22.12■■□□□ 1.13
RNF40-203ENST00000493683 GPHNQ9NQX3 736 aaPredicted RBP22.12■■□□□ 1.13
RNF40-203ENST00000493683 STK32BQ9NY57 414 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 KDRP35968 1356 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 RABGGTAQ92696 567 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
RNF40-203ENST00000493683 LONP1P36776 959 aaKnown RBP22.12■■□□□ 1.13
RNF40-203ENST00000493683 HOXA7P31268 230 aaPredicted RBP22.12■■□□□ 1.13
RNF40-203ENST00000493683 PDZD4Q76G19 769 aaPredicted RBP22.12■■□□□ 1.13
RNF40-203ENST00000493683 GPBP1Q86WP2 473 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 HVCN1Q96D96 273 aa22.12■■□□□ 1.13
RNF40-203ENST00000493683 LUC7L3O95232 432 aaKnown RBP22.11■■□□□ 1.13
RNF40-203ENST00000493683 MUM1Q2TAK8 710 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 PRPF31Q8WWY3 499 aaKnown RBP22.11■■□□□ 1.13
RNF40-203ENST00000493683 CCNL1Q9UK58 526 aaPredicted RBP22.11■■□□□ 1.13
RNF40-203ENST00000493683 GAS7O60861 476 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 PSMD6Q15008 389 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 ARHGAP44Q17R89 818 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 IVNS1ABPQ9Y6Y0 642 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 EIF4A1P60842 406 aaKnown RBP22.11■■□□□ 1.13
RNF40-203ENST00000493683 GRM1Q13255 1194 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 AFG3L2Q9Y4W6 797 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 TXNDC9O14530 226 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 CCDC13Q8IYE1 715 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 USP28Q96RU2 1077 aa22.11■■□□□ 1.13
RNF40-203ENST00000493683 OR52Z1P0C646 297 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 TNNI1P19237 187 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 NR1I2O75469 434 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 ANKRD42Q8N9B4 389 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 NOD1Q9Y239 953 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 CAPN7Q9Y6W3 813 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 MAST1Q9Y2H9 1570 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 NEURL1BA8MQ27 555 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 LAD1O00515 517 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 EVI5O60447 810 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 H2AFZP0C0S5 128 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms